skip to main content
Guest
My Research
My Account
Sign out
Sign in
This feature requires javascript
Library Search
Find Databases
Browse Search
E-Journals A-Z
E-Books A-Z
Citation Linker
Help
Language:
English
Vietnamese
This feature required javascript
This feature requires javascript
Primo Search
All Library Resources
All
Course Materials
Course Materials
Search For:
Clear Search Box
Search in:
All Library Resources
Or hit Enter to replace search target
Or select another collection:
Search in:
All Library Resources
Search in:
Print Resources
Search in:
Digital Resources
Search in:
Online E-Resources
Advanced Search
Browse Search
This feature requires javascript
Search Limited to:
Search Limited to:
Resource type
criteria input
All items
Books
Articles
Images
Audio Visual
Maps
Graduate theses
Show Results with:
criteria input
that contain my query words
with my exact phrase
starts with
Show Results with:
Search type Index
criteria input
anywhere in the record
in the title
as author/creator
in subject
Full Text
ISBN
ISSN
TOC
Keyword
Field
Show Results with:
in the title
Show Results with:
anywhere in the record
in the title
as author/creator
in subject
Full Text
ISBN
ISSN
TOC
Keyword
Field
This feature requires javascript
Method optimization for denaturing gradient gel electrophoresis (DGGE) analysis of microflora from Eucalyptus sp. wood chips intended for pulping
African journal of biotechnology, 2014-01, Vol.13 (3), p.356-365
ISSN: 1684-5315 ;EISSN: 1684-5315 ;DOI: 10.5897/AJB2013.12899
Full text available
Citations
Cited by
View Online
Details
Recommendations
Reviews
Times Cited
External Links
This feature requires javascript
Actions
Add to My Research
Remove from My Research
E-mail
Print
Permalink
Citation
EasyBib
EndNote
RefWorks
Delicious
Export RIS
Export BibTeX
This feature requires javascript
Title:
Method optimization for denaturing gradient gel electrophoresis (DGGE) analysis of microflora from Eucalyptus sp. wood chips intended for pulping
Author:
Lucretia, Ramnath
;
Tamara, Bush
;
Roshini, Govinden
Subjects:
Eucalyptus
Is Part Of:
African journal of biotechnology, 2014-01, Vol.13 (3), p.356-365
Description:
Eucalyptus is the predominant exotic wood species used in South African pulp and paper industry. Once chipped and stored in piles, the wood becomes vulnerable to microbial degradation and spontaneous combustion. The denaturing gradient gel electrophoresis (DGGE) technique was optimized for the detection of microbial diversity in the wood. Wood chips were collected and milled to different specifications. The 16S and 18S rRNA genes were amplified using 338F-GC/518R and 933F-GC/1387R for bacteria and N526/518R-GC and EF4F/518R for fungi. Several gel gradients were examined to determine optimal separation. A comparison of DGGE profiles revealed greater diversity in the milled wood chips amplified using primer sets of 338F-GC/518R (16S) and N526/518R-GC (18S) with gradients of 30/60% (16S) and 25/50% (18S), respectively. Once optimized, this protocol was tested against five samples to assess its applicability to wood chip samples. Profiles were generated and amplicons excised from gels, re-amplified and sequenced to determine origin of DNA. Using this technique, 18 bacterial and 12 fungal species were identified, compared to ten bacterial and nine fungal isolates which were identified using the culturing technique and standard rRNA gene sequence analysis. The optimised DGGE is an appropriate tool for microbial community studies of Eucalyptus wood chips.
Language:
English
Identifier:
ISSN: 1684-5315
EISSN: 1684-5315
DOI: 10.5897/AJB2013.12899
Source:
Academic Journals
African Journals Online (Open Access)
GFMER Free Medical Journals
This feature requires javascript
This feature requires javascript
Back to results list
This feature requires javascript
This feature requires javascript
Searching Remote Databases, Please Wait
Searching for
in
scope:(TDTS),scope:(SFX),scope:(TDT),scope:(SEN),primo_central_multiple_fe
Show me what you have so far
This feature requires javascript
This feature requires javascript