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DPARSF: A MATLAB Toolbox for "Pipeline" Data Analysis of Resting-State fMRI

Frontiers in systems neuroscience, 2010-01, Vol.4, p.13-13 [Peer Reviewed Journal]

Copyright © 2010 Yan and Zang. 2010 ;ISSN: 1662-5137 ;EISSN: 1662-5137 ;DOI: 10.3389/fnsys.2010.00013 ;PMID: 20577591

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  • Title:
    DPARSF: A MATLAB Toolbox for "Pipeline" Data Analysis of Resting-State fMRI
  • Author: Chao-Gan, Yan ; Yu-Feng, Zang
  • Subjects: data analysis ; DPARSF ; Neuroscience ; Rest ; Resting-state fMRI ; SPM
  • Is Part Of: Frontiers in systems neuroscience, 2010-01, Vol.4, p.13-13
  • Description: Resting-state functional magnetic resonance imaging (fMRI) has attracted more and more attention because of its effectiveness, simplicity and non-invasiveness in exploration of the intrinsic functional architecture of the human brain. However, user-friendly toolbox for "pipeline" data analysis of resting-state fMRI is still lacking. Based on some functions in Statistical Parametric Mapping (SPM) and Resting-State fMRI Data Analysis Toolkit (REST), we have developed a MATLAB toolbox called Data Processing Assistant for Resting-State fMRI (DPARSF) for "pipeline" data analysis of resting-state fMRI. After the user arranges the Digital Imaging and Communications in Medicine (DICOM) files and click a few buttons to set parameters, DPARSF will then give all the preprocessed (slice timing, realign, normalize, smooth) data and results for functional connectivity, regional homogeneity, amplitude of low-frequency fluctuation (ALFF), and fractional ALFF. DPARSF can also create a report for excluding subjects with excessive head motion and generate a set of pictures for easily checking the effect of normalization. In addition, users can also use DPARSF to extract time courses from regions of interest.
  • Publisher: Switzerland: Frontiers Research Foundation
  • Language: English
  • Identifier: ISSN: 1662-5137
    EISSN: 1662-5137
    DOI: 10.3389/fnsys.2010.00013
    PMID: 20577591
  • Source: GFMER Free Medical Journals
    PubMed Central
    Alma/SFX Local Collection
    ROAD: Directory of Open Access Scholarly Resources
    DOAJ Directory of Open Access Journals
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