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The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 updateNucleic acids research, 2018-07, Vol.46 (W1), p.W537-W544 [Peer Reviewed Journal]The Author(s) 2018. Published by Oxford University Press on behalf of Nucleic Acids Research. 2018 ;ISSN: 0305-1048 ;EISSN: 1362-4962 ;DOI: 10.1093/nar/gky379 ;PMID: 29790989Full text available |
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Flexible statistical methods for estimating and testing effects in genomic studies with multiple conditionsNature genetics, 2019-01, Vol.51 (1), p.187-195 [Peer Reviewed Journal]Copyright Nature Publishing Group Jan 2019 ;ISSN: 1061-4036 ;EISSN: 1546-1718 ;DOI: 10.1038/s41588-018-0268-8 ;PMID: 30478440Full text available |
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Integrating Hi-C links with assembly graphs for chromosome-scale assemblyPLoS computational biology, 2019-08, Vol.15 (8), p.e1007273-e1007273 [Peer Reviewed Journal]COPYRIGHT 2019 Public Library of Science ;COPYRIGHT 2019 Public Library of Science ;This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication: https://creativecommons.org/publicdomain/zero/1.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;ISSN: 1553-7358 ;ISSN: 1553-734X ;EISSN: 1553-7358 ;DOI: 10.1371/journal.pcbi.1007273 ;PMID: 31433799Full text available |
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Genomic Risk Prediction of Coronary Artery Disease in 480,000 Adults: Implications for Primary PreventionJournal of the American College of Cardiology, 2018-10, Vol.72 (16), p.1883-1893 [Peer Reviewed Journal]Copyright © 2018 The Authors. Published by Elsevier Inc. All rights reserved. ;Copyright Elsevier Limited Oct 16, 2018 ;2018 The Authors 2018 ;ISSN: 0735-1097 ;EISSN: 1558-3597 ;DOI: 10.1016/j.jacc.2018.07.079 ;PMID: 30309464Full text available |
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Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2021Nucleic Acids Research, 2021-01, Vol.49 (D1), p.D18-D28 [Peer Reviewed Journal]The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research. 2021 ;The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research. ;2020. This work is licensed under http://creativecommons.org/licenses/by-nc/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;ISSN: 0305-1048 ;EISSN: 1362-4962 ;DOI: 10.1093/nar/gkaa1022 ;PMID: 33175170Digital Resources/Online E-Resources |
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Integrative Genomics Viewer (IGV): high-performance genomics data visualization and explorationBriefings in bioinformatics, 2013-03, Vol.14 (2), p.178-192 [Peer Reviewed Journal]The Author(s) 2012. Published by Oxford University Press. 2012 ;ISSN: 1467-5463 ;EISSN: 1477-4054 ;DOI: 10.1093/bib/bbs017 ;PMID: 22517427Full text available |
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Visualizing and comparing circular genomes using the CGView family of toolsBriefings in bioinformatics, 2019-07, Vol.20 (4), p.1576-1582 [Peer Reviewed Journal]The Author 2017. Published by Oxford University Press. 2017 ;The Author 2017. Published by Oxford University Press. ;ISSN: 1467-5463 ;EISSN: 1477-4054 ;DOI: 10.1093/bib/bbx081 ;PMID: 28968859Full text available |
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Nanopore sequencing technology and tools for genome assembly: computational analysis of the current state, bottlenecks and future directionsBriefings in bioinformatics, 2019-07, Vol.20 (4), p.1542-1559 [Peer Reviewed Journal]The Author(s) 2018. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com 2018 ;The Author(s) 2018. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com. ;The Author(s) 2018. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com ;ISSN: 1467-5463 ;EISSN: 1477-4054 ;DOI: 10.1093/bib/bby017 ;PMID: 29617724Full text available |
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Microbial genome analysis: the COG approachBriefings in bioinformatics, 2019-07, Vol.20 (4), p.1063-1070 [Peer Reviewed Journal]Published by Oxford University Press 2017. This work is written by US Government employees and is in the public domain in the US. 2017 ;Published by Oxford University Press 2017. This work is written by US Government employees and is in the public domain in the US. ;ISSN: 1467-5463 ;EISSN: 1477-4054 ;DOI: 10.1093/bib/bbx117 ;PMID: 28968633Full text available |
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Computational methods for transcriptome annotation and quantification using RNA-seqNature methods, 2011-06, Vol.8 (6), p.469-477 [Peer Reviewed Journal]COPYRIGHT 2011 Nature Publishing Group ;Copyright Nature Publishing Group Jun 2011 ;ISSN: 1548-7091 ;EISSN: 1548-7105 ;DOI: 10.1038/nmeth.1613 ;PMID: 21623353Full text available |
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Using Tablet for visual exploration of second-generation sequencing dataBriefings in bioinformatics, 2013-03, Vol.14 (2), p.193-202 [Peer Reviewed Journal]ISSN: 1467-5463 ;EISSN: 1477-4054 ;DOI: 10.1093/bib/bbs012 ;PMID: 22445902Full text available |
12 |
Material Type: Article
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Guidelines for Genome-Scale Analysis of Biological RhythmsJournal of biological rhythms, 2017-10, Vol.32 (5), p.380-393 [Peer Reviewed Journal]2017 The Author(s) ;ISSN: 0748-7304 ;EISSN: 1552-4531 ;DOI: 10.1177/0748730417728663Digital Resources/Online E-Resources |
13 |
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Improving the Assessment of the Outcome of Nonsynonymous SNVs with a Consensus Deleteriousness Score, CondelAmerican journal of human genetics, 2011-04, Vol.88 (4), p.440-449 [Peer Reviewed Journal]2011 The American Society of Human Genetics ;2015 INIST-CNRS ;Copyright © 2011 The American Society of Human Genetics. Published by Elsevier Inc. All rights reserved. ;Copyright Cell Press Apr 8, 2011 ;info:eu-repo/semantics/openAccess © Elsevier This is the published version of an article http://dx.doi.org/10.1016/j.ajhg.2011.03.004 that appeared in the journal American journal of human genetics. It is published in an Open Archive under an Elsevier user license. Details of this licence are available here: http://www.elsevier.com/about/open-access/open-access-policies/oa-license-policy/elsevier-user-license ;2011 The American Society of Human Genetics. Published by Elsevier Ltd. All right reserved. 2011 The American Society of Human Genetics ;ISSN: 0002-9297 ;EISSN: 1537-6605 ;DOI: 10.1016/j.ajhg.2011.03.004 ;PMID: 21457909 ;CODEN: AJHGAGFull text available |
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Tackling the widespread and critical impact of batch effects in high-throughput dataNature reviews. Genetics, 2010-10, Vol.11 (10), p.733-739 [Peer Reviewed Journal]2015 INIST-CNRS ;COPYRIGHT 2010 Nature Publishing Group ;COPYRIGHT 2010 Nature Publishing Group ;Copyright Nature Publishing Group Oct 2010 ;2010 Macmillan Publishers Limited. All rights reserved 2010 ;ISSN: 1471-0056 ;EISSN: 1471-0064 ;DOI: 10.1038/nrg2825 ;PMID: 20838408Full text available |
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Material Type: Article
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The UCSC genome browser and associated toolsBriefings in bioinformatics, 2013-03, Vol.14 (2), p.144-161 [Peer Reviewed Journal]Copyright Oxford Publishing Limited(England) Mar 2013 ;The Author 2012. Published by Oxford University Press. 2012 ;ISSN: 1467-5463 ;EISSN: 1477-4054 ;DOI: 10.1093/bib/bbs038 ;PMID: 22908213Full text available |
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Material Type: Article
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Inferring horizontal gene transferPLoS computational biology, 2015-05, Vol.11 (5), p.e1004095-e1004095 [Peer Reviewed Journal]COPYRIGHT 2015 Public Library of Science ;COPYRIGHT 2015 Public Library of Science ;2015 Ravenhall et al 2015 Ravenhall et al ;2015 Public Library of Science. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Ravenhall M, Skunca N, Lassalle F, Dessimoz C (2015) Inferring Horizontal Gene Transfer. PLoS Comput Biol 11(5): e1004095. doi:10.1371/journal.pcbi.1004095 ;ISSN: 1553-7358 ;ISSN: 1553-734X ;EISSN: 1553-7358 ;DOI: 10.1371/journal.pcbi.1004095 ;PMID: 26020646Full text available |
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Public human microbiome data are dominated by highly developed countriesPLoS biology, 2022-02, Vol.20 (2), p.e3001536-e3001536 [Peer Reviewed Journal]2022 Abdill et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2022 Abdill et al 2022 Abdill et al ;ISSN: 1545-7885 ;ISSN: 1544-9173 ;EISSN: 1545-7885 ;DOI: 10.1371/journal.pbio.3001536 ;PMID: 35167588Full text available |
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Material Type: Article
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Genomics for the worldNature (London), 2011-07, Vol.475 (7355), p.163-165 [Peer Reviewed Journal]Copyright Nature Publishing Group Jul 14, 2011 ;ISSN: 0028-0836 ;EISSN: 1476-4687 ;DOI: 10.1038/475163a ;PMID: 21753830 ;CODEN: NATUASFull text available |
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A new multipoint method for genome-wide association studies by imputation of genotypesNature genetics, 2007-07, Vol.39 (7), p.906-913 [Peer Reviewed Journal]2007 INIST-CNRS ;COPYRIGHT 2007 Nature Publishing Group ;Copyright Nature Publishing Group Jul 2007 ;ISSN: 1061-4036 ;EISSN: 1546-1718 ;DOI: 10.1038/ng2088 ;PMID: 17572673 ;CODEN: NGENECFull text available |
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Quantifying the impact of public omics dataNature communications, 2019-08, Vol.10 (1), p.3512-10, Article 3512 [Peer Reviewed Journal]2019. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2019 ;ISSN: 2041-1723 ;EISSN: 2041-1723 ;DOI: 10.1038/s41467-019-11461-w ;PMID: 31383865Full text available |