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1
ABNER: an open source tool for automatically tagging genes, proteins and other entity names in text
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Article
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ABNER: an open source tool for automatically tagging genes, proteins and other entity names in text

Bioinformatics, 2005-07, Vol.21 (14), p.3191-3192 [Peer Reviewed Journal]

2005 INIST-CNRS ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bti475 ;PMID: 15860559 ;CODEN: BOINFP

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2
Accelerated curation of checkpoint inhibitor-induced colitis cases from electronic health records
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Accelerated curation of checkpoint inhibitor-induced colitis cases from electronic health records

JAMIA open, 2023-04, Vol.6 (1), p.ooad017-ooad017 [Peer Reviewed Journal]

The Author(s) 2023. Published by Oxford University Press on behalf of the American Medical Informatics Association. 2023 ;The Author(s) 2023. Published by Oxford University Press on behalf of the American Medical Informatics Association. ;COPYRIGHT 2023 Oxford University Press ;ISSN: 2574-2531 ;EISSN: 2574-2531 ;DOI: 10.1093/jamiaopen/ooad017 ;PMID: 37012912

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3
Accessing bioscience images from abstract sentences
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Article
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Accessing bioscience images from abstract sentences

Bioinformatics, 2006-07, Vol.22 (14), p.e547-e556 [Peer Reviewed Journal]

The Author 2006. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org 2006 ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btl261 ;PMID: 16873519 ;CODEN: BOINFP

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4
Accomplishments and challenges in literature data mining for biology
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Article
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Accomplishments and challenges in literature data mining for biology

Bioinformatics, 2002-12, Vol.18 (12), p.1553-1561 [Peer Reviewed Journal]

ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/18.12.1553 ;PMID: 12490438

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5
Actionable, long-term stable and semantic web compatible identifiers for access to biological collection objects
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Article
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Actionable, long-term stable and semantic web compatible identifiers for access to biological collection objects

Database : the journal of biological databases and curation, 2017-01, Vol.2017 (1) [Peer Reviewed Journal]

The Author(s) 2017. Published by Oxford University Press. 2017 ;The Author(s) 2017. Published by Oxford University Press. ;ISSN: 1758-0463 ;EISSN: 1758-0463 ;DOI: 10.1093/database/bax003 ;PMID: 28365724

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6
ADAM: another database of abbreviations in MEDLINE
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Article
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ADAM: another database of abbreviations in MEDLINE

Bioinformatics, 2006-11, Vol.22 (22), p.2813-2818 [Peer Reviewed Journal]

2007 INIST-CNRS ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btl480 ;PMID: 16982707 ;CODEN: BOINFP

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7
Adapting and evaluating a deep learning language model for clinical why-question answering
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Article
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Adapting and evaluating a deep learning language model for clinical why-question answering

JAMIA open, 2020-04, Vol.3 (1), p.16-20 [Peer Reviewed Journal]

The Author(s) 2020. Published by Oxford University Press on behalf of the American Medical Informatics Association. ;COPYRIGHT 2020 Oxford University Press ;The Author(s) 2020. Published by Oxford University Press on behalf of the American Medical Informatics Association. 2020 ;ISSN: 2574-2531 ;EISSN: 2574-2531 ;DOI: 10.1093/jamiaopen/ooz072 ;PMID: 32607483

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8
Advancing entity recognition in biomedicine via instruction tuning of large language models
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Advancing entity recognition in biomedicine via instruction tuning of large language models

Bioinformatics (Oxford, England), 2024-03, Vol.40 (4) [Peer Reviewed Journal]

The Author(s) 2024. Published by Oxford University Press. ;The Author(s) 2024. Published by Oxford University Press. 2024 ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btae163 ;PMID: 38514400

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9
Adverse drug event presentation and tracking (ADEPT): semiautomated, high throughput pharmacovigilance using real-world data
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Article
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Adverse drug event presentation and tracking (ADEPT): semiautomated, high throughput pharmacovigilance using real-world data

JAMIA open, 2020-10, Vol.3 (3), p.413-421 [Peer Reviewed Journal]

The Author(s) 2020. Published by Oxford University Press on behalf of the American Medical Informatics Association. ;COPYRIGHT 2020 Oxford University Press ;The Author(s) 2020. Published by Oxford University Press on behalf of the American Medical Informatics Association. 2020 ;ISSN: 2574-2531 ;EISSN: 2574-2531 ;DOI: 10.1093/jamiaopen/ooaa031 ;PMID: 33215076

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10
Adverse drug event rates in pediatric pulmonary hypertension: a comparison of real-world data sources
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Article
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Adverse drug event rates in pediatric pulmonary hypertension: a comparison of real-world data sources

Journal of the American Medical Informatics Association : JAMIA, 2020-02, Vol.27 (2), p.294-300 [Peer Reviewed Journal]

The Author(s) 2019. Published by Oxford University Press on behalf of the American Medical Informatics Association. 2019 ;The Author(s) 2019. Published by Oxford University Press on behalf of the American Medical Informatics Association. ;ISSN: 1527-974X ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1093/jamia/ocz194 ;PMID: 31769835

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11
Adverse drug events and medication relation extraction in electronic health records with ensemble deep learning methods
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Article
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Adverse drug events and medication relation extraction in electronic health records with ensemble deep learning methods

Journal of the American Medical Informatics Association : JAMIA, 2020-01, Vol.27 (1), p.39-46 [Peer Reviewed Journal]

The Author(s) 2019. Published by Oxford University Press on behalf of the American Medical Informatics Association. 2019 ;The Author(s) 2019. Published by Oxford University Press on behalf of the American Medical Informatics Association. ;ISSN: 1527-974X ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1093/jamia/ocz101 ;PMID: 31390003

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12
AI am a rheumatologist: a practical primer to large language models for rheumatologists
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Article
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AI am a rheumatologist: a practical primer to large language models for rheumatologists

Rheumatology (Oxford, England), 2023-10, Vol.62 (10), p.3256-3260 [Peer Reviewed Journal]

The Author(s) 2023. Published by Oxford University Press on behalf of the British Society for Rheumatology. 2023 ;The Author(s) 2023. Published by Oxford University Press on behalf of the British Society for Rheumatology. ;ISSN: 1462-0324 ;EISSN: 1462-0332 ;DOI: 10.1093/rheumatology/kead291 ;PMID: 37307079

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13
AliasServer: a web server to handle multiple aliases used to refer to proteins
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Article
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AliasServer: a web server to handle multiple aliases used to refer to proteins

Bioinformatics, 2004-09, Vol.20 (14), p.2331-2332 [Peer Reviewed Journal]

Distributed under a Creative Commons Attribution 4.0 International License ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bth241 ;PMID: 15059813 ;CODEN: BOINFP

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14
AliBaba: PubMed as a graph
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Article
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AliBaba: PubMed as a graph

Bioinformatics, 2006-10, Vol.22 (19), p.2444-2445 [Peer Reviewed Journal]

2007 INIST-CNRS ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btl408 ;PMID: 16870931 ;CODEN: BOINFP

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15
America's racial framework of superiority and Americanness embedded in natural language
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America's racial framework of superiority and Americanness embedded in natural language

PNAS nexus, 2024-01, Vol.3 (1), p.pgad485-pgad485 [Peer Reviewed Journal]

The Author(s) 2024. Published by Oxford University Press on behalf of National Academy of Sciences. ;COPYRIGHT 2024 Oxford University Press ;The Author(s) 2024. Published by Oxford University Press on behalf of National Academy of Sciences. 2024 ;ISSN: 2752-6542 ;EISSN: 2752-6542 ;DOI: 10.1093/pnasnexus/pgad485 ;PMID: 38274118

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16
An approximate matching algorithm for finding (sub-)optimal sequences in S-attributed grammars
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Article
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An approximate matching algorithm for finding (sub-)optimal sequences in S-attributed grammars

Bioinformatics, 2002-10, Vol.18 (suppl-2), p.S250-S259 [Peer Reviewed Journal]

ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/18.suppl_2.S250 ;PMID: 12386010 ;CODEN: BOINFP

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17
An architecture for biological information extraction and representation
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Article
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An architecture for biological information extraction and representation

Bioinformatics, 2005-02, Vol.21 (4), p.430-438 [Peer Reviewed Journal]

ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bti187 ;PMID: 15608051 ;CODEN: BOINFP

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18
An artificial intelligence approach to COVID-19 infection risk assessment in virtual visits: A case report
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Article
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An artificial intelligence approach to COVID-19 infection risk assessment in virtual visits: A case report

Journal of the American Medical Informatics Association : JAMIA, 2020-08, Vol.27 (8), p.1321-1325 [Peer Reviewed Journal]

The Author(s) 2020. Published by Oxford University Press on behalf of the American Medical Informatics Association. 2020 ;The Author(s) 2020. Published by Oxford University Press on behalf of the American Medical Informatics Association. ;ISSN: 1527-974X ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1093/jamia/ocaa105 ;PMID: 32449766

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19
AnaGram: protein function assignment
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Article
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AnaGram: protein function assignment

Bioinformatics, 2004-01, Vol.20 (2), p.291-292 [Peer Reviewed Journal]

2004 INIST-CNRS ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btg414 ;PMID: 14734328 ;CODEN: BOINFP

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20
Analyzing an Emerging Pandemic on Twitter: Monkeypox
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Article
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Analyzing an Emerging Pandemic on Twitter: Monkeypox

Open forum infectious diseases, 2023-04, Vol.10 (4), p.ofad142-ofad142 [Peer Reviewed Journal]

The Author(s) 2023. Published by Oxford University Press on behalf of Infectious Diseases Society of America. 2023 ;The Author(s) 2023. Published by Oxford University Press on behalf of Infectious Diseases Society of America. ;COPYRIGHT 2023 Oxford University Press ;ISSN: 2328-8957 ;EISSN: 2328-8957 ;DOI: 10.1093/ofid/ofad142 ;PMID: 37035497

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