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Material Type: Article
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Productive visualization of high-throughput sequencing data using the SeqCode open portable platformEnrique Blanco, Mar González-Ramírez, Luciano di Croce 2021. This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made https://creativecommons.org/licenses/by/4.0/ info:eu-repo/semantics/openAccess ;ISSN: 2045-2322 ;EISSN: 2045-2322 ;DOI: 10.1038/s41598-021-98889-7Full text available |
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Material Type: Article
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pyFoldX: enabling biomolecular analysis and engineering along structural ensemblesLeandro G. Radusky, Luis Serrano 2022. Published by Oxford University Press. This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial Licens (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited https://creativecommons.org/licenses/by-nc/4.0/ info:eu-repo/semantics/openAccess ;ISSN: 1367-4811 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btac072Full text available |
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Material Type: Article
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Beacon v2 and Beacon networks: A "lingua franca" for federated data discovery in biomedical genomics, and beyond2022 Jordi Rambla et al. Human Mutation published by Wiley Periodicals LLC. This is an open access article under the terms of the Creative Commons Attribution‐NonCommercial‐NoDerivs License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made https://creativecommons.org/licenses/by-nc-nd/4.0/ info:eu-repo/semantics/openAccess ;ISSN: 1059-7794 ;EISSN: 1098-1004 ;DOI: 10.1002/humu.24369Digital Resources/Online E-Resources |
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Material Type: Article
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MultiDataSet: an R package for encapsulating multiple data sets with application to omic data integrationCarles Hernandez-Ferrer, Carlos Ruiz-Arenas, Alba Beltran-Gomila, Juan R. González. This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/) http://creativecommons.org/licenses/by/4.0/ info:eu-repo/semantics/openAccess ;ISSN: 1471-2105 ;EISSN: 1471-2105 ;DOI: 10.1186/s12859-016-1455-1Full text available |
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Material Type: Article
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MultiDataSet: an R package for encapsulating multiple data sets with application to omic data integrationBMC bioinformatics, 2017 [Peer Reviewed Journal]info:eu-repo/semantics/openAccess © Carles Hernandez-Ferrer, Carlos Ruiz-Arenas, Alba Beltran-Gomila, Juan R. González. This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/) http://creativecommons.org/licenses/by/4.0/ ;ISSN: 1471-2105 ;EISSN: 1471-2105 ;DOI: 10.1186/s12859-016-1455-1Full text available |
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Material Type: Article
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Lisen&Curate: a platform to facilitate gathering textual evidence for curation of regulation of transcription initiation in bacteria2021 Martín Díaz-Rodríguez et al. Published by Elsevier B.V. This is an open access article under the CC BY-NC-ND license http://creativecommons.org/licenses/by-nc-nd/4.0/ http://creativecommons.org/licenses/by-nc-nd/4.0/ info:eu-repo/semantics/openAccess ;ISSN: 1874-9399 ;EISSN: 1876-4320 ;DOI: 10.1016/j.bbagrm.2021.194753Digital Resources/Online E-Resources |
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Material Type: Article
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Computational methods for RNA modification detection from nanopore direct RNA sequencing data2021 Mattia Furlan et al. Published by Informa UK Limited, trading as Taylor & Francis Group. This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivatives License (http://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited, and is not altered, transformed, or built upon in any way http://creativecommons.org/licenses/by-nc-nd/4.0/ info:eu-repo/semantics/openAccess ;ISSN: 1547-6286 ;EISSN: 1555-8584 ;DOI: 10.1080/15476286.2021.1978215Full text available |
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Material Type: Article
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CTDquerier: a bioconductor R package for Comparative Toxicogenomics DatabaseTM data extraction, visualization and enrichment of environmental and toxicological studiesCarles Hernandez-Ferrer, Juan R Gonzalez 2018. Published by Oxford University Press. This is an Open Access article distributed under the terms of a Creative Commons Attribution License http://creativecommons.org/licenses/by-nc/4.0/ info:eu-repo/semantics/openAccess ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty326Full text available |
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Material Type: Article
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CTDquerier: a bioconductor R package for Comparative Toxicogenomics DatabaseTM data extraction, visualization and enrichment of environmental and toxicological studiesBioinformatics, 2018-09, Vol.34 (18), p.3235-3237 [Peer Reviewed Journal]The Author(s) 2018. Published by Oxford University Press. 2018 ;Carles Hernandez-Ferrer, Juan R Gonzalez 2018. Published by Oxford University Press. This is an Open Access article distributed under the terms of a Creative Commons Attribution License info:eu-repo/semantics/openAccess http://creativecommons.org/licenses/by-nc/4.0/ ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty326 ;PMID: 29688259Full text available |
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Material Type: Article
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Still using MS Excel? Implementation of the WHO Go.Data software for the COVID‐19 contact tracingcc-by (c) Llupià, Anna et al., 2020 http://creativecommons.org/licenses/by/3.0/es info:eu-repo/semantics/openAccess ;ISSN: 2398-8835 ;EISSN: 2398-8835 ;DOI: 10.1002/hsr2.164Full text available |
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Material Type: Article
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The crowd in requirements engineering: the landscape and challengesinfo:eu-repo/semantics/openAccess ;ISSN: 0740-7459 ;EISSN: 1937-4194 ;DOI: 10.1109/MS.2017.33Digital Resources/Online E-Resources |
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Material Type: Article
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Continuously Assessing and Improving Software Quality With Software Analytics Tools: A Case StudyIEEE access, 2019-01, Vol.7, p.68219-68239 [Peer Reviewed Journal]Copyright The Institute of Electrical and Electronics Engineers, Inc. (IEEE) 2019 ;Attribution 3.0 Spain info:eu-repo/semantics/openAccess http://creativecommons.org/licenses/by/3.0/es/ ;ISSN: 2169-3536 ;EISSN: 2169-3536 ;DOI: 10.1109/ACCESS.2019.2917403 ;CODEN: IAECCGFull text available |
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Material Type: Article
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DnaSP v5: a software for comprehensive analysis of DNA polymorphism dataBioinformatics, 2009-06, Vol.25 (11), p.1451-1452 [Peer Reviewed Journal]The Author 2009. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org 2009 ;2009 INIST-CNRS ;(c) Librado Sanz, Pablo et al., 2009 info:eu-repo/semantics/openAccess ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btp187 ;PMID: 19346325 ;CODEN: BOINFPFull text available |
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Material Type: Article
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rDock: a fast, versatile and open source program for docking ligands to proteins and nucleic acidsPLoS computational biology, 2014-04, Vol.10 (4), p.e1003571-e1003571 [Peer Reviewed Journal]COPYRIGHT 2014 Public Library of Science ;COPYRIGHT 2014 Public Library of Science ;cc-by (c) Ruiz-Carmona, Sergio et al., 2014 info:eu-repo/semantics/openAccess http://creativecommons.org/licenses/by/3.0/es ;2014 Ruiz-Carmona et al 2014 Ruiz-Carmona et al ;2014 Ruiz-Carmona et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Ruiz-Carmona S, Alvarez-Garcia D, Foloppe N, Garmendia-Doval AB, Juhos S, et al. (2014) rDock: A Fast, Versatile and Open Source Program for Docking Ligands to Proteins and Nucleic Acids. PLoS Comput Biol 10(4): e1003571. doi:10.1371/journal.pcbi.1003571 ;ISSN: 1553-7358 ;ISSN: 1553-734X ;EISSN: 1553-7358 ;DOI: 10.1371/journal.pcbi.1003571 ;PMID: 24722481Full text available |
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Material Type: Article
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Alpsnmr: an r package for signal processing of fully untargeted nmr-based metabolomics(c) Madrid Gambín, Francisco Javier et al., 2020 info:eu-repo/semantics/openAccess ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btaa022Full text available |
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Material Type: Article
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Software modernization revisited: Challenges and prospectsComputer (Long Beach, Calif.), 2015-08, Vol.48 (8), p.76-80 [Peer Reviewed Journal]CC BY-NC-ND info:eu-repo/semantics/openAccess http://creativecommons.org/licenses/by-nc-nd/3.0/es/ ;Distributed under a Creative Commons Attribution 4.0 International License ;ISSN: 0018-9162 ;EISSN: 1558-0814 ;DOI: 10.1109/MC.2015.234Digital Resources/Online E-Resources |
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Material Type: Article
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Interoperable and scalable data analysis with microservices: applications in metabolomicscc-by (c) Emami Khoonsari, Payam et al., 2019 http://creativecommons.org/licenses/by/3.0/es/ info:eu-repo/semantics/openAccess ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btz160Full text available |
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Material Type: Article
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Sphericity and roundness computation for particles using the extreme vertices modelAttribution-NonCommercial-NoDerivs 3.0 Spain info:eu-repo/semantics/openAccess http://creativecommons.org/licenses/by-nc-nd/3.0/es/ ;ISSN: 1877-7503 ;EISSN: 1877-7511 ;DOI: 10.1016/j.jocs.2018.11.005Digital Resources/Online E-Resources |
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Material Type: Article
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Open source software ecosystems : a systematic mappinginfo:eu-repo/semantics/openAccess ;ISSN: 0950-5849 ;EISSN: 1873-6025 ;DOI: 10.1016/j.infsof.2017.07.007Digital Resources/Online E-Resources |
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Material Type: Article
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eTOXlab, an open source modeling framework for implementing predictive models in production environments2015 Carrió et al.; licensee Springer. /nThis is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. https://creativecommons.org/licenses/by/4.0/ info:eu-repo/semantics/openAccess ;ISSN: 1758-2946 ;EISSN: 1758-2946 ;DOI: 10.1186/s13321-015-0058-6Full text available |