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1
A White-Box Machine Learning Approach for Revealing Antibiotic Mechanisms of Action
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A White-Box Machine Learning Approach for Revealing Antibiotic Mechanisms of Action

Cell, 2019-05, Vol.177 (6), p.1649-1661.e9 [Peer Reviewed Journal]

2019 Elsevier Inc. ;Copyright © 2019 Elsevier Inc. All rights reserved. ;ISSN: 0092-8674 ;EISSN: 1097-4172 ;DOI: 10.1016/j.cell.2019.04.016 ;PMID: 31080069

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2
Constraint-based models predict metabolic and associated cellular functions
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Constraint-based models predict metabolic and associated cellular functions

Nature reviews. Genetics, 2014-02, Vol.15 (2), p.107-120 [Peer Reviewed Journal]

COPYRIGHT 2014 Nature Publishing Group ;COPYRIGHT 2014 Nature Publishing Group ;Copyright Nature Publishing Group Feb 2014 ;ISSN: 1471-0056 ;EISSN: 1471-0064 ;DOI: 10.1038/nrg3643 ;PMID: 24430943

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3
The Untapped Opportunity and Challenge of Immunometabolism: A New Paradigm for Drug Discovery
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The Untapped Opportunity and Challenge of Immunometabolism: A New Paradigm for Drug Discovery

Cell metabolism, 2020-01, Vol.31 (1), p.26-34 [Peer Reviewed Journal]

2019 Elsevier Inc. ;Copyright © 2019 Elsevier Inc. All rights reserved. ;ISSN: 1550-4131 ;EISSN: 1932-7420 ;DOI: 10.1016/j.cmet.2019.11.014 ;PMID: 31839485

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4
Chlorogenic acid (CGA): A pharmacological review and call for further research
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Chlorogenic acid (CGA): A pharmacological review and call for further research

Biomedicine & pharmacotherapy, 2018-01, Vol.97, p.67-74 [Peer Reviewed Journal]

2017 Elsevier Masson SAS ;Copyright © 2017 Elsevier Masson SAS. All rights reserved. ;ISSN: 0753-3322 ;EISSN: 1950-6007 ;DOI: 10.1016/j.biopha.2017.10.064 ;PMID: 29080460

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5
Metabolic Reprogramming of Immune Cells in Cancer Progression
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Metabolic Reprogramming of Immune Cells in Cancer Progression

Immunity (Cambridge, Mass.), 2015-09, Vol.43 (3), p.435-449 [Peer Reviewed Journal]

2015 Elsevier Inc. ;Copyright © 2015 Elsevier Inc. All rights reserved. ;Copyright Elsevier Limited Sep 15, 2015 ;ISSN: 1074-7613 ;EISSN: 1097-4180 ;DOI: 10.1016/j.immuni.2015.09.001 ;PMID: 26377897

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6
Network Integration of Parallel Metabolic and Transcriptional Data Reveals Metabolic Modules that Regulate Macrophage Polarization
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Network Integration of Parallel Metabolic and Transcriptional Data Reveals Metabolic Modules that Regulate Macrophage Polarization

Immunity (Cambridge, Mass.), 2015-03, Vol.42 (3), p.419-430 [Peer Reviewed Journal]

2015 Elsevier Inc. ;Copyright © 2015 Elsevier Inc. All rights reserved. ;Copyright Elsevier Limited Mar 17, 2015 ;ISSN: 1074-7613 ;EISSN: 1097-4180 ;DOI: 10.1016/j.immuni.2015.02.005 ;PMID: 25786174

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7
Low yield and abiotic origin of N 2 O formed by the complete nitrifier Nitrospira inopinata
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Low yield and abiotic origin of N 2 O formed by the complete nitrifier Nitrospira inopinata

Nature communications, 2019-12, Vol.10 (1), p.1836 [Peer Reviewed Journal]

EISSN: 2041-1723 ;DOI: 10.1038/s41467-019-09790-x ;PMID: 31015413

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8
The Reactome Pathway Knowledgebase
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The Reactome Pathway Knowledgebase

Nucleic acids research, 2018-01, Vol.46 (D1), p.D649-D655 [Peer Reviewed Journal]

The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research. 2018 ;The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research. ;ISSN: 0305-1048 ;EISSN: 1362-4962 ;DOI: 10.1093/nar/gkx1132 ;PMID: 29145629

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9
Asparagine promotes cancer cell proliferation through use as an amino acid exchange factor
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Asparagine promotes cancer cell proliferation through use as an amino acid exchange factor

Nature communications, 2016-04, Vol.7 (1), p.11457-11457, Article 11457 [Peer Reviewed Journal]

Copyright Nature Publishing Group Apr 2016 ;Copyright © 2016, Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. 2016 Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. ;ISSN: 2041-1723 ;EISSN: 2041-1723 ;DOI: 10.1038/ncomms11457 ;PMID: 27126896

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10
KEGG: integrating viruses and cellular organisms
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KEGG: integrating viruses and cellular organisms

Nucleic Acids Research, 2021-01, Vol.49 (D1), p.D545-D551 [Peer Reviewed Journal]

The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research. 2021 ;The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research. ;2020. This work is licensed under http://creativecommons.org/licenses/by-nc/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;ISSN: 0305-1048 ;EISSN: 1362-4962 ;DOI: 10.1093/nar/gkaa970 ;PMID: 33125081

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11
The reactome pathway knowledgebase
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The reactome pathway knowledgebase

Nucleic acids research, 2020-01, Vol.48 (D1), p.D498-D503 [Peer Reviewed Journal]

The Author(s) 2019. Published by Oxford University Press on behalf of Nucleic Acids Research. 2019 ;The Author(s) 2019. Published by Oxford University Press on behalf of Nucleic Acids Research. ;ISSN: 0305-1048 ;EISSN: 1362-4962 ;DOI: 10.1093/nar/gkz1031 ;PMID: 31691815

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12
Multifaceted role of branched-chain amino acid metabolism in cancer
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Article
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Multifaceted role of branched-chain amino acid metabolism in cancer

Oncogene, 2020-10, Vol.39 (44), p.6747-6756 [Peer Reviewed Journal]

COPYRIGHT 2020 Nature Publishing Group ;The Author(s), under exclusive licence to Springer Nature Limited 2020. ;ISSN: 0950-9232 ;EISSN: 1476-5594 ;DOI: 10.1038/s41388-020-01480-z ;PMID: 32978521

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13
A Global Coexpression Network Approach for Connecting Genes to Specialized Metabolic Pathways in Plants
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Article
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A Global Coexpression Network Approach for Connecting Genes to Specialized Metabolic Pathways in Plants

The Plant cell, 2017-05, Vol.29 (5), p.944-959 [Peer Reviewed Journal]

2017 American Society of Plant Biologists ;2017 American Society of Plant Biologists. All rights reserved. ;Copyright American Society of Plant Biologists May 2017 ;2017 American Society of Plant Biologists. All rights reserved. 2017 ;ISSN: 1040-4651 ;EISSN: 1532-298X ;DOI: 10.1105/tpc.17.00009 ;PMID: 28408660

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14
Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways
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Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways

Proceedings of the National Academy of Sciences - PNAS, 2013-04, Vol.110 (16), p.6601-6606 [Peer Reviewed Journal]

copyright © 1993-2008 National Academy of Sciences of the United States of America ;Copyright National Academy of Sciences Apr 16, 2013 ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.1302961110 ;PMID: 23576753

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15
iPath2.0: interactive pathway explorer
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Article
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iPath2.0: interactive pathway explorer

Nucleic acids research, 2011-07, Vol.39 (suppl_2), p.W412-W415 [Peer Reviewed Journal]

The Author(s) 2011. Published by Oxford University Press. 2011 ;ISSN: 0305-1048 ;EISSN: 1362-4962 ;DOI: 10.1093/nar/gkr313 ;PMID: 21546551

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16
Long noncoding RNAs as regulators of cancer immunity
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Article
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Long noncoding RNAs as regulators of cancer immunity

Molecular oncology, 2019-01, Vol.13 (1), p.61-73 [Peer Reviewed Journal]

2018 The Authors. Published by FEBS Press and John Wiley & Sons Ltd. ;ISSN: 1574-7891 ;EISSN: 1878-0261 ;DOI: 10.1002/1878-0261.12413 ;PMID: 30499165

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17
The Cellular and Molecular Basis of Translational Immunometabolism
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Article
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The Cellular and Molecular Basis of Translational Immunometabolism

Immunity (Cambridge, Mass.), 2015-09, Vol.43 (3), p.421-434 [Peer Reviewed Journal]

2015 Elsevier Inc. ;Copyright © 2015 Elsevier Inc. All rights reserved. ;Copyright Elsevier Limited Sep 15, 2015 ;ISSN: 1074-7613 ;EISSN: 1097-4180 ;DOI: 10.1016/j.immuni.2015.08.023 ;PMID: 26377896

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18
Adenovirus E4ORF1-Induced MYC Activation Promotes Host Cell Anabolic Glucose Metabolism and Virus Replication
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Article
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Adenovirus E4ORF1-Induced MYC Activation Promotes Host Cell Anabolic Glucose Metabolism and Virus Replication

Cell metabolism, 2014-04, Vol.19 (4), p.694-701 [Peer Reviewed Journal]

2014 Elsevier Inc. ;Copyright © 2014 Elsevier Inc. All rights reserved. ;2014 Elsevier Inc. All rights reserved. 2014 ;ISSN: 1550-4131 ;EISSN: 1932-7420 ;DOI: 10.1016/j.cmet.2014.03.009 ;PMID: 24703700

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19
A PML–PPAR-δ pathway for fatty acid oxidation regulates hematopoietic stem cell maintenance
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A PML–PPAR-δ pathway for fatty acid oxidation regulates hematopoietic stem cell maintenance

Nature medicine, 2012-09, Vol.18 (9), p.1350-1358 [Peer Reviewed Journal]

ISSN: 1078-8956 ;EISSN: 1546-170X ;DOI: 10.1038/nm.2882 ;PMID: 22902876

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20
KEGG: new perspectives on genomes, pathways, diseases and drugs
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Article
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KEGG: new perspectives on genomes, pathways, diseases and drugs

Nucleic acids research, 2017-01, Vol.45 (D1), p.D353-D361 [Peer Reviewed Journal]

The Author(s) 2016. Published by Oxford University Press on behalf of Nucleic Acids Research. ;The Author(s) 2016. Published by Oxford University Press on behalf of Nucleic Acids Research. 2017 ;ISSN: 0305-1048 ;EISSN: 1362-4962 ;DOI: 10.1093/nar/gkw1092 ;PMID: 27899662

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