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1
Co-infection with SARS-CoV-2 Omicron and Delta variants revealed by genomic surveillance
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Co-infection with SARS-CoV-2 Omicron and Delta variants revealed by genomic surveillance

Nature communications, 2022-05, Vol.13 (1), p.2745-2745, Article 2745 [Peer Reviewed Journal]

2022. The Author(s). ;The Author(s) 2022. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2022 ;ISSN: 2041-1723 ;EISSN: 2041-1723 ;DOI: 10.1038/s41467-022-30518-x ;PMID: 35585202

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2
Emergence of Poultry-Associated Human Salmonella enterica Serovar Abortusovis Infections, New South Wales, Australia
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Emergence of Poultry-Associated Human Salmonella enterica Serovar Abortusovis Infections, New South Wales, Australia

Emerging infectious diseases, 2024-04, Vol.30 (4), p.691-700 [Peer Reviewed Journal]

COPYRIGHT 2024 U.S. National Center for Infectious Diseases ;2024 ;ISSN: 1080-6040 ;EISSN: 1080-6059 ;DOI: 10.3201/eid3004.230958 ;PMID: 38526124

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3
Persistent Salmonella enterica serovar Typhi sub-populations within host interrogated by whole genome sequencing and metagenomics
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Persistent Salmonella enterica serovar Typhi sub-populations within host interrogated by whole genome sequencing and metagenomics

PloS one, 2023-08, Vol.18 (8), p.e0289070-e0289070 [Peer Reviewed Journal]

COPYRIGHT 2023 Public Library of Science ;2023 Sim et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2023 Sim et al 2023 Sim et al ;2023 Sim et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0289070 ;PMID: 37611017

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4
Multidrug-Resistant Salmonella enterica 4,[5],12:i:- Sequence Type 34, New South Wales, Australia, 2016-2017
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Multidrug-Resistant Salmonella enterica 4,[5],12:i:- Sequence Type 34, New South Wales, Australia, 2016-2017

Emerging infectious diseases, 2018-04, Vol.24 (4), p.751-753 [Peer Reviewed Journal]

COPYRIGHT 2018 U.S. National Center for Infectious Diseases ;COPYRIGHT 2018 U.S. National Center for Infectious Diseases ;ISSN: 1080-6040 ;EISSN: 1080-6059 ;DOI: 10.3201/eid2404.171619 ;PMID: 29553318

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5
Novel Salmonella enterica Serovar Typhimurium Genotype Levels as Herald of Seasonal Salmonellosis Epidemics
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Novel Salmonella enterica Serovar Typhimurium Genotype Levels as Herald of Seasonal Salmonellosis Epidemics

Emerging infectious diseases, 2018-06, Vol.24 (6), p.1079-1082 [Peer Reviewed Journal]

COPYRIGHT 2018 U.S. National Center for Infectious Diseases ;COPYRIGHT 2018 U.S. National Center for Infectious Diseases ;ISSN: 1080-6040 ;EISSN: 1080-6059 ;DOI: 10.3201/eid2406.171096 ;PMID: 29774859

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6
Whole Genome Sequencing Demonstrates Limited Transmission within Identified Mycobacterium tuberculosis Clusters in New South Wales, Australia
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Whole Genome Sequencing Demonstrates Limited Transmission within Identified Mycobacterium tuberculosis Clusters in New South Wales, Australia

PloS one, 2016-10, Vol.11 (10), p.e0163612-e0163612 [Peer Reviewed Journal]

COPYRIGHT 2016 Public Library of Science ;COPYRIGHT 2016 Public Library of Science ;2016 Gurjav et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2016 Gurjav et al 2016 Gurjav et al ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0163612 ;PMID: 27737005

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7
Genome-wide networks reveal emergence of epidemic strains of Salmonella Enteritidis
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Genome-wide networks reveal emergence of epidemic strains of Salmonella Enteritidis

International journal of infectious diseases, 2022-04, Vol.117, p.65-73 [Peer Reviewed Journal]

2022 The Authors ;Copyright © 2022 The Authors. Published by Elsevier Ltd.. All rights reserved. ;ISSN: 1201-9712 ;EISSN: 1878-3511 ;DOI: 10.1016/j.ijid.2022.01.056 ;PMID: 35108613

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8
Correlation between expression levels of IL-37, GM-CSF, and CRP in peripheral blood and atherosclerosis and plaque stability
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Correlation between expression levels of IL-37, GM-CSF, and CRP in peripheral blood and atherosclerosis and plaque stability

European journal of inflammation, 2019, Vol.17, p.205873921984406 [Peer Reviewed Journal]

The Author(s) 2019 ;The Author(s) 2019. This work is licensed under the Creative Commons Attribution – Non-Commercial License http://www.creativecommons.org/licenses/by-nc/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;ISSN: 2058-7392 ;ISSN: 1721-727X ;EISSN: 2058-7392 ;DOI: 10.1177/2058739219844068

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9
Multistate Outbreak of Salmonella enterica Serovar Heidelberg with Unidentified Source, Australia, 2018-2019
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Multistate Outbreak of Salmonella enterica Serovar Heidelberg with Unidentified Source, Australia, 2018-2019

Emerging infectious diseases, 2022-01, Vol.28 (1), p.238-241 [Peer Reviewed Journal]

COPYRIGHT 2022 U.S. National Center for Infectious Diseases ;Published 2022. This article is a U.S. Government work and is in the public domain in the USA. ;2022 ;ISSN: 1080-6040 ;EISSN: 1080-6059 ;DOI: 10.3201/eid2801.211462 ;PMID: 34932458

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10
Molecular characterizations of PCR-positive Mycoplasma pneumoniae specimens collected from Australia and China
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Molecular characterizations of PCR-positive Mycoplasma pneumoniae specimens collected from Australia and China

Journal of clinical microbiology, 2014-05, Vol.52 (5), p.1478-1482 [Peer Reviewed Journal]

Copyright © 2014, American Society for Microbiology. All Rights Reserved. 2014 American Society for Microbiology ;ISSN: 0095-1137 ;EISSN: 1098-660X ;DOI: 10.1128/jcm.03366-13 ;PMID: 24574282

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11
Burkholderia lata Infections from Intrinsically Contaminated Chlorhexidine Mouthwash, Australia, 2016
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Burkholderia lata Infections from Intrinsically Contaminated Chlorhexidine Mouthwash, Australia, 2016

Emerging infectious diseases, 2018-11, Vol.24 (11), p.2109-2111 [Peer Reviewed Journal]

COPYRIGHT 2018 U.S. National Center for Infectious Diseases ;COPYRIGHT 2018 U.S. National Center for Infectious Diseases ;ISSN: 1080-6040 ;EISSN: 1080-6059 ;DOI: 10.3201/eid2411.171929 ;PMID: 30334703

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12
Whole Genome Sequencing of Australian Candida glabrata Isolates Reveals Genetic Diversity and Novel Sequence Types
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Whole Genome Sequencing of Australian Candida glabrata Isolates Reveals Genetic Diversity and Novel Sequence Types

Frontiers in microbiology, 2018-12, Vol.9, p.2946-2946 [Peer Reviewed Journal]

Copyright © 2018 Biswas, Marcelino, Van Hal, Halliday, Martinez, Wang, Kidd, Kennedy, Marriott, Morrissey, Arthur, Weeks, Slavin, Sorrell, Sintchenko, Meyer and Chen. 2018 Biswas, Marcelino, Van Hal, Halliday, Martinez, Wang, Kidd, Kennedy, Marriott, Morrissey, Arthur, Weeks, Slavin, Sorrell, Sintchenko, Meyer and Chen ;ISSN: 1664-302X ;EISSN: 1664-302X ;DOI: 10.3389/fmicb.2018.02946 ;PMID: 30559734

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13
Rapid Detection of Isoniazid, Rifampin, and Ofloxacin Resistance in Mycobacterium tuberculosis Clinical Isolates Using High-Resolution Melting Analysis
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Rapid Detection of Isoniazid, Rifampin, and Ofloxacin Resistance in Mycobacterium tuberculosis Clinical Isolates Using High-Resolution Melting Analysis

Journal of Clinical Microbiology, 2011-10, Vol.49 (10), p.3450-3457 [Peer Reviewed Journal]

2015 INIST-CNRS ;Copyright © 2011, American Society for Microbiology. All Rights Reserved. 2011 American Society for Microbiology ;ISSN: 0095-1137 ;EISSN: 1098-660X ;DOI: 10.1128/JCM.01068-11 ;PMID: 21832014 ;CODEN: JCMIDW

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14
Presumptive Identification of Clostridium difficile Strain 027/NAP1/BI on Cepheid Xpert: Interpret with Caution
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Presumptive Identification of Clostridium difficile Strain 027/NAP1/BI on Cepheid Xpert: Interpret with Caution

Journal of clinical microbiology, 2011-10, Vol.49 (10), p.3719-3721 [Peer Reviewed Journal]

2015 INIST-CNRS ;Copyright © 2011, American Society for Microbiology. All Rights Reserved. 2011 American Society for Microbiology ;ISSN: 0095-1137 ;EISSN: 1098-660X ;DOI: 10.1128/JCM.00752-11 ;PMID: 21849697 ;CODEN: JCMIDW

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15
Francisella tularensis ssp. holarctica in Ringtail Possums, Australia
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Francisella tularensis ssp. holarctica in Ringtail Possums, Australia

Emerging infectious diseases, 2017-07, Vol.23 (7), p.1198-1201 [Peer Reviewed Journal]

ISSN: 1080-6040 ;EISSN: 1080-6059 ;DOI: 10.3201/eid2307.161863 ;PMID: 28628459

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16
Genomic Epidemiology and Multilevel Genome Typing of Australian Salmonella enterica Serovar Enteritidis
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Genomic Epidemiology and Multilevel Genome Typing of Australian Salmonella enterica Serovar Enteritidis

Microbiology spectrum, 2023-02, Vol.11 (1), p.e0301422-e0301422 [Peer Reviewed Journal]

Copyright © 2023 Luo et al. ;Copyright © 2023 Luo et al. 2023 Luo et al. ;ISSN: 2165-0497 ;EISSN: 2165-0497 ;DOI: 10.1128/spectrum.03014-22 ;PMID: 36625638

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17
MBL-mediated opsonophagocytosis of Candida albicans by human neutrophils is coupled with intracellular Dectin-1-triggered ROS production
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MBL-mediated opsonophagocytosis of Candida albicans by human neutrophils is coupled with intracellular Dectin-1-triggered ROS production

PloS one, 2012-12, Vol.7 (12), p.e50589-e50589 [Peer Reviewed Journal]

COPYRIGHT 2012 Public Library of Science ;COPYRIGHT 2012 Public Library of Science ;2012 Li et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: https://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2012 Li et al 2012 Li et al ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0050589 ;PMID: 23239982

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18
A laboratory framework for ongoing optimization of amplification-based genomic surveillance programs
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A laboratory framework for ongoing optimization of amplification-based genomic surveillance programs

Microbiology spectrum, 2023-12, Vol.11 (6), p.e0220223-e0220223 [Peer Reviewed Journal]

Copyright © 2023 Lam et al. ;Copyright © 2023 Lam et al. 2023 Lam et al. ;ISSN: 2165-0497 ;EISSN: 2165-0497 ;DOI: 10.1128/spectrum.02202-23 ;PMID: 37966271

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19
Comparison of Two Capillary Gel Electrophoresis Systems for Clostridium difficile Ribotyping, Using a Panel of Ribotype 027 Isolates and Whole-Genome Sequences as a Reference Standard
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Comparison of Two Capillary Gel Electrophoresis Systems for Clostridium difficile Ribotyping, Using a Panel of Ribotype 027 Isolates and Whole-Genome Sequences as a Reference Standard

Journal of Clinical Microbiology, 2012-08, Vol.50 (8), p.2755-2760 [Peer Reviewed Journal]

2015 INIST-CNRS ;Copyright © 2012, American Society for Microbiology. All Rights Reserved. 2012 American Society for Microbiology ;ISSN: 0095-1137 ;EISSN: 1098-660X ;DOI: 10.1128/JCM.00777-12 ;PMID: 22692737 ;CODEN: JCMIDW

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20
Prompt control of a Serratia marcescens outbreak in a neonatal intensive care unit informed by whole-genome sequencing and comprehensive infection control intervention package
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Prompt control of a Serratia marcescens outbreak in a neonatal intensive care unit informed by whole-genome sequencing and comprehensive infection control intervention package

Antimicrobial stewardship & healthcare epidemiology : ASHE, 2022, Vol.2 (1), p.e104-e104, Article e104 [Peer Reviewed Journal]

The Author(s) 2022. ;The Author(s) 2022 2022 The Author(s) ;ISSN: 2732-494X ;EISSN: 2732-494X ;DOI: 10.1017/ash.2022.234 ;PMID: 36483351

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