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1
The Evolution of Life Is a Road Paved with the DNA Quadruplet Symmetry and the Supersymmetry Genetic Code
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The Evolution of Life Is a Road Paved with the DNA Quadruplet Symmetry and the Supersymmetry Genetic Code

International journal of molecular sciences, 2023-08, Vol.24 (15), p.12029 [Peer Reviewed Journal]

COPYRIGHT 2023 MDPI AG ;2023 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2023 by the authors. 2023 ;ISSN: 1422-0067 ;ISSN: 1661-6596 ;EISSN: 1422-0067 ;DOI: 10.3390/ijms241512029 ;PMID: 37569405

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2
From Matter to Form: the Evolution of the Genetic Code as Semio-Poiesis
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From Matter to Form: the Evolution of the Genetic Code as Semio-Poiesis

Linguistic Frontiers, 2020-12, Vol.3 (2), p.44-56 [Peer Reviewed Journal]

ISSN: 2544-6339 ;EISSN: 2544-6339 ;DOI: 10.2478/lf-2020-0014

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3
Precise optical control of gene expression in C elegans using improved genetic code expansion and Cre recombinase
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Precise optical control of gene expression in C elegans using improved genetic code expansion and Cre recombinase

eLife, 2021-08, Vol.10 [Peer Reviewed Journal]

2021, Davis et al. ;2021, Davis et al. This work is published under https://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2021, Davis et al 2021 Davis et al ;ISSN: 2050-084X ;EISSN: 2050-084X ;DOI: 10.7554/eLife.67075 ;PMID: 34350826

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4
A Guide for Using Deep Learning for Complex Trait Genomic Prediction
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A Guide for Using Deep Learning for Complex Trait Genomic Prediction

Genes, 2019-07, Vol.10 (7), p.553 [Peer Reviewed Journal]

ISSN: 2073-4425 ;EISSN: 2073-4425 ;DOI: 10.3390/genes10070553 ;PMID: 31330861

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5
Improved annotation of protein-coding genes boundaries in metazoan mitochondrial genomes
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Improved annotation of protein-coding genes boundaries in metazoan mitochondrial genomes

Nucleic acids research, 2019-11, Vol.47 (20), p.10543-10552 [Peer Reviewed Journal]

The Author(s) 2019. Published by Oxford University Press on behalf of Nucleic Acids Research. 2019 ;The Author(s) 2019. Published by Oxford University Press on behalf of Nucleic Acids Research. ;Distributed under a Creative Commons Attribution 4.0 International License ;ISSN: 0305-1048 ;EISSN: 1362-4962 ;DOI: 10.1093/nar/gkz833 ;PMID: 31584075

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6
The Supersymmetry Genetic Code Table and Quadruplet Symmetries of DNA Molecules Are Unchangeable and Synchronized with Codon-Free Energy Mapping during Evolution
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The Supersymmetry Genetic Code Table and Quadruplet Symmetries of DNA Molecules Are Unchangeable and Synchronized with Codon-Free Energy Mapping during Evolution

Genes, 2023-12, Vol.14 (12), p.2200 [Peer Reviewed Journal]

2023 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;ISSN: 2073-4425 ;EISSN: 2073-4425 ;DOI: 10.3390/genes14122200 ;PMID: 38137022

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7
Bacterial cellulose spheroids as building blocks for 3D and patterned living materials and for regeneration
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Bacterial cellulose spheroids as building blocks for 3D and patterned living materials and for regeneration

Nature communications, 2021-08, Vol.12 (1), p.5027-5027, Article 5027 [Peer Reviewed Journal]

The Author(s) 2021. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2021 ;ISSN: 2041-1723 ;EISSN: 2041-1723 ;DOI: 10.1038/s41467-021-25350-8 ;PMID: 34413311

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8
Inclusion of the fitness sharing technique in an evolutionary algorithm to analyze the fitness landscape of the genetic code adaptability
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Inclusion of the fitness sharing technique in an evolutionary algorithm to analyze the fitness landscape of the genetic code adaptability

BMC bioinformatics, 2017-03, Vol.18 (1), p.195-195, Article 195 [Peer Reviewed Journal]

Copyright BioMed Central 2017 ;The Author(s) 2017 ;ISSN: 1471-2105 ;EISSN: 1471-2105 ;DOI: 10.1186/s12859-017-1608-x ;PMID: 28347270

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9
In silico prediction of the metabolism of Blastocrithidia nonstop, a trypanosomatid with non-canonical genetic code
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In silico prediction of the metabolism of Blastocrithidia nonstop, a trypanosomatid with non-canonical genetic code

BMC genomics, 2024-02, Vol.25 (1), p.184-184 [Peer Reviewed Journal]

2024. The Author(s). ;COPYRIGHT 2024 BioMed Central Ltd. ;2024. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;ISSN: 1471-2164 ;EISSN: 1471-2164 ;DOI: 10.1186/s12864-024-10094-8 ;PMID: 38365628

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10
Extreme plastomes in holoparasitic Balanophoraceae are not the norm
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Extreme plastomes in holoparasitic Balanophoraceae are not the norm

BMC genomics, 2023-06, Vol.24 (1), p.330-330, Article 330 [Peer Reviewed Journal]

2023. The Author(s). ;COPYRIGHT 2023 BioMed Central Ltd. ;2023. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2023 ;ISSN: 1471-2164 ;EISSN: 1471-2164 ;DOI: 10.1186/s12864-023-09422-1 ;PMID: 37322447

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11
An integrated, structure- and energy-based view of the genetic code
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An integrated, structure- and energy-based view of the genetic code

Nucleic acids research, 2016-09, Vol.44 (17), p.8020-8040 [Peer Reviewed Journal]

The Author(s) 2016. Published by Oxford University Press on behalf of Nucleic Acids Research. ;Distributed under a Creative Commons Attribution 4.0 International License ;The Author(s) 2016. Published by Oxford University Press on behalf of Nucleic Acids Research. 2016 ;ISSN: 0305-1048 ;EISSN: 1362-4962 ;DOI: 10.1093/nar/gkw608 ;PMID: 27448410

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12
Groups of Symmetries of the Two Classes of Synthetases in the Four-Dimensional Hypercubes of the Extended Code Type II
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Groups of Symmetries of the Two Classes of Synthetases in the Four-Dimensional Hypercubes of the Extended Code Type II

Life (Basel, Switzerland), 2023-09, Vol.13 (10), p.2002 [Peer Reviewed Journal]

COPYRIGHT 2023 MDPI AG ;2023 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2023 by the authors. 2023 ;ISSN: 2075-1729 ;EISSN: 2075-1729 ;DOI: 10.3390/life13102002 ;PMID: 37895385

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13
Mining and unearthing hidden biosynthetic potential
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Mining and unearthing hidden biosynthetic potential

Nature communications, 2021-06, Vol.12 (1), p.3864-3864, Article 3864 [Peer Reviewed Journal]

The Author(s) 2021. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2021 ;ISSN: 2041-1723 ;EISSN: 2041-1723 ;DOI: 10.1038/s41467-021-24133-5 ;PMID: 34162873

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14
TranslatorX: multiple alignment of nucleotide sequences guided by amino acid translations
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TranslatorX: multiple alignment of nucleotide sequences guided by amino acid translations

Nucleic acids research, 2010-07, Vol.38 (Web Server issue), p.W7-W13 [Peer Reviewed Journal]

The Author(s) 2010. Published by Oxford University Press. 2010 ;ISSN: 0305-1048 ;ISSN: 1362-4962 ;EISSN: 1362-4962 ;DOI: 10.1093/nar/gkq291 ;PMID: 20435676

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15
Designer exosomes produced by implanted cells intracerebrally deliver therapeutic cargo for Parkinson's disease treatment
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Designer exosomes produced by implanted cells intracerebrally deliver therapeutic cargo for Parkinson's disease treatment

Nature communications, 2018-04, Vol.9 (1), p.1305-10, Article 1305 [Peer Reviewed Journal]

2018. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2018 ;ISSN: 2041-1723 ;EISSN: 2041-1723 ;DOI: 10.1038/s41467-018-03733-8 ;PMID: 29610454

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16
Recent Development of Genetic Code Expansion for Posttranslational Modification Studies
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Recent Development of Genetic Code Expansion for Posttranslational Modification Studies

Molecules (Basel, Switzerland), 2018-07, Vol.23 (7), p.1662 [Peer Reviewed Journal]

2018. This work is licensed under https://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2018 by the authors. 2018 ;ISSN: 1420-3049 ;EISSN: 1420-3049 ;DOI: 10.3390/molecules23071662 ;PMID: 29986538

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17
Correction: Visualization of Glutamine Transporter Activities in Living Cells Using Genetically Encoded Glutamine Sensors
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Correction: Visualization of Glutamine Transporter Activities in Living Cells Using Genetically Encoded Glutamine Sensors

PloS one, 2015-10, Vol.10 (10), p.e0140088-e0140088 [Peer Reviewed Journal]

COPYRIGHT 2015 Public Library of Science ;COPYRIGHT 2015 Public Library of Science ;2015 Gruenwald et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2015 Gruenwald et al 2015 Gruenwald et al ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0140088 ;PMID: 26436549

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18
Recent developments of engineered translational machineries for the incorporation of non-canonical amino acids into polypeptides
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Recent developments of engineered translational machineries for the incorporation of non-canonical amino acids into polypeptides

International Journal of Molecular Sciences, 2015-03, Vol.16 (3), p.6513-6531 [Peer Reviewed Journal]

Copyright MDPI AG 2015 ;2015 by the authors; licensee MDPI, Basel, Switzerland. 2015 ;ISSN: 1422-0067 ;ISSN: 1661-6596 ;EISSN: 1422-0067 ;DOI: 10.3390/ijms16036513 ;PMID: 25803109

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19
Large Phylogenomic Data sets Reveal Deep Relationships and Trait Evolution in Chlorophyte Green Algae
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Large Phylogenomic Data sets Reveal Deep Relationships and Trait Evolution in Chlorophyte Green Algae

Genome biology and evolution, 2021-07, Vol.13 (7)

The Author(s) 2021. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. 2021 ;The Author(s) 2021. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. ;ISSN: 1759-6653 ;EISSN: 1759-6653 ;DOI: 10.1093/gbe/evab101 ;PMID: 33950183

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20
"Superwobbling" and tRNA-34 Wobble and tRNA-37 Anticodon Loop Modifications in Evolution and Devolution of the Genetic Code
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"Superwobbling" and tRNA-34 Wobble and tRNA-37 Anticodon Loop Modifications in Evolution and Devolution of the Genetic Code

Life (Basel, Switzerland), 2022-02, Vol.12 (2), p.252 [Peer Reviewed Journal]

2022 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2022 by the authors. 2022 ;ISSN: 2075-1729 ;EISSN: 2075-1729 ;DOI: 10.3390/life12020252 ;PMID: 35207539

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