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1
Long-term nutrient inputs shift soil microbial functional profiles of phosphorus cycling in diverse agroecosystems
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Long-term nutrient inputs shift soil microbial functional profiles of phosphorus cycling in diverse agroecosystems

The ISME Journal, 2020-03, Vol.14 (3), p.757-770 [Peer Reviewed Journal]

This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2019 ;ISSN: 1751-7362 ;EISSN: 1751-7370 ;DOI: 10.1038/s41396-019-0567-9 ;PMID: 31827246

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2
The consequences of niche and physiological differentiation of archaeal and bacterial ammonia oxidisers for nitrous oxide emissions
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The consequences of niche and physiological differentiation of archaeal and bacterial ammonia oxidisers for nitrous oxide emissions

The ISME Journal, 2018-04, Vol.12 (4), p.1084-1093 [Peer Reviewed Journal]

2018. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;Distributed under a Creative Commons Attribution 4.0 International License ;The Author(s) 2018 ;ISSN: 1751-7362 ;EISSN: 1751-7370 ;DOI: 10.1038/s41396-017-0025-5 ;PMID: 29386627

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3
Anaerobic methane oxidation coupled to manganese reduction by members of the Methanoperedenaceae
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Anaerobic methane oxidation coupled to manganese reduction by members of the Methanoperedenaceae

The ISME Journal, 2020-04, Vol.14 (4), p.1030-1041 [Peer Reviewed Journal]

The Author(s) 2020. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2020 ;ISSN: 1751-7362 ;EISSN: 1751-7370 ;DOI: 10.1038/s41396-020-0590-x ;PMID: 31988473

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4
An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea
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An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

The ISME Journal, 2012-03, Vol.6 (3), p.610-618 [Peer Reviewed Journal]

Copyright Nature Publishing Group Mar 2012 ;Copyright © 2012 International Society for Microbial Ecology 2012 International Society for Microbial Ecology ;ISSN: 1751-7362 ;EISSN: 1751-7370 ;DOI: 10.1038/ismej.2011.139 ;PMID: 22134646

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5
Minimum entropy decomposition: unsupervised oligotyping for sensitive partitioning of high-throughput marker gene sequences
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Minimum entropy decomposition: unsupervised oligotyping for sensitive partitioning of high-throughput marker gene sequences

The ISME Journal, 2015-03, Vol.9 (4), p.968-979 [Peer Reviewed Journal]

Copyright Nature Publishing Group Mar 2015 ;Distributed under a Creative Commons Attribution 4.0 International License ;Copyright © 2015 International Society for Microbial Ecology 2015 International Society for Microbial Ecology ;ISSN: 1751-7362 ;EISSN: 1751-7370 ;DOI: 10.1038/ismej.2014.195 ;PMID: 25325381

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6
Evaluating rRNA as an indicator of microbial activity in environmental communities: limitations and uses
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Evaluating rRNA as an indicator of microbial activity in environmental communities: limitations and uses

The ISME Journal, 2013-11, Vol.7 (11), p.2061-2068 [Peer Reviewed Journal]

Copyright Nature Publishing Group Nov 2013 ;Distributed under a Creative Commons Attribution 4.0 International License ;Copyright © 2013 International Society for Microbial Ecology 2013 International Society for Microbial Ecology ;ISSN: 1751-7362 ;EISSN: 1751-7370 ;DOI: 10.1038/ismej.2013.102 ;PMID: 23823491

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7
Ammonia-oxidizing archaea possess a wide range of cellular ammonia affinities
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Ammonia-oxidizing archaea possess a wide range of cellular ammonia affinities

The ISME Journal, 2022-01, Vol.16 (1), p.272-283 [Peer Reviewed Journal]

2021. The Author(s). ;The Author(s) 2021. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;Distributed under a Creative Commons Attribution 4.0 International License ;The Author(s) 2021 ;ISSN: 1751-7362 ;EISSN: 1751-7370 ;DOI: 10.1038/s41396-021-01064-z ;PMID: 34316016

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8
A strong link between marine microbial community composition and function challenges the idea of functional redundancy
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A strong link between marine microbial community composition and function challenges the idea of functional redundancy

The ISME Journal, 2018-10, Vol.12 (10), p.2470-2478 [Peer Reviewed Journal]

Copyright Nature Publishing Group Oct 2018 ;Distributed under a Creative Commons Attribution 4.0 International License ;International Society for Microbial Ecology 2018 ;ISSN: 1751-7362 ;EISSN: 1751-7370 ;DOI: 10.1038/s41396-018-0158-1 ;PMID: 29925880

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9
Expanded diversity of microbial groups that shape the dissimilatory sulfur cycle
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Expanded diversity of microbial groups that shape the dissimilatory sulfur cycle

The ISME Journal, 2018-07, Vol.12 (7), p.1715-1728 [Peer Reviewed Journal]

2018. This work is published under http://creativecommons.org/licenses/by-nc-sa/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2018 ;ISSN: 1751-7362 ;EISSN: 1751-7370 ;DOI: 10.1038/s41396-018-0078-0 ;PMID: 29467397

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10
High-resolution phylogenetic microbial community profiling
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High-resolution phylogenetic microbial community profiling

The ISME Journal, 2016-08, Vol.10 (8), p.2020-2032 [Peer Reviewed Journal]

Copyright Nature Publishing Group Aug 2016 ;Copyright © 2016 International Society for Microbial Ecology 2016 International Society for Microbial Ecology ;ISSN: 1751-7362 ;EISSN: 1751-7370 ;DOI: 10.1038/ismej.2015.249 ;PMID: 26859772

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11
Biotic interactions between benthic infauna and aerobic methanotrophs mediate methane fluxes from coastal sediments
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Biotic interactions between benthic infauna and aerobic methanotrophs mediate methane fluxes from coastal sediments

The ISME Journal, 2024-01, Vol.18 (1) [Peer Reviewed Journal]

ISSN: 1751-7370 ;ISSN: 1751-7362 ;EISSN: 1751-7370 ;DOI: 10.1093/ismejo/wrae013

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12
Niche differentiation is spatially and temporally regulated in the rhizosphere
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Article
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Niche differentiation is spatially and temporally regulated in the rhizosphere

The ISME Journal, 2020-04, Vol.14 (4), p.999-1014 [Peer Reviewed Journal]

2020© This is a U.S. government work and not under copyright protection in the U.S.; foreign copyright protection may apply 2020 ;This is a U.S. government work and not under copyright protection in the U.S.; foreign copyright protection may apply 2020 ;ISSN: 1751-7362 ;EISSN: 1751-7370 ;DOI: 10.1038/s41396-019-0582-x ;PMID: 31953507

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13
The unaccounted yet abundant nitrous oxide-reducing microbial community: a potential nitrous oxide sink
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The unaccounted yet abundant nitrous oxide-reducing microbial community: a potential nitrous oxide sink

The ISME Journal, 2013-02, Vol.7 (2), p.417-426 [Peer Reviewed Journal]

Copyright Nature Publishing Group Feb 2013 ;Distributed under a Creative Commons Attribution 4.0 International License ;Copyright © 2013 International Society for Microbial Ecology 2013 International Society for Microbial Ecology ;ISSN: 1751-7362 ;ISSN: 1751-7370 ;EISSN: 1751-7370 ;DOI: 10.1038/ismej.2012.125 ;PMID: 23151640

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14
Loss in microbial diversity affects nitrogen cycling in soil
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Article
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Loss in microbial diversity affects nitrogen cycling in soil

The ISME Journal, 2013-08, Vol.7 (8), p.1609-1619 [Peer Reviewed Journal]

Copyright Nature Publishing Group Aug 2013 ;Distributed under a Creative Commons Attribution 4.0 International License ;Copyright © 2013 International Society for Microbial Ecology 2013 International Society for Microbial Ecology ;ISSN: 1751-7362 ;ISSN: 1751-7370 ;EISSN: 1751-7370 ;DOI: 10.1038/ismej.2013.34 ;PMID: 23466702

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15
Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients
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Article
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Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients

The ISME Journal, 2012-05, Vol.6 (5), p.1007-1017 [Peer Reviewed Journal]

Copyright Nature Publishing Group May 2012 ;Copyright © 2012 International Society for Microbial Ecology 2012 International Society for Microbial Ecology ;ISSN: 1751-7362 ;EISSN: 1751-7370 ;DOI: 10.1038/ismej.2011.159 ;PMID: 22134642

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16
Vibrio crassostreae, a benign oyster colonizer turned into a pathogen after plasmid acquisition
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Article
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Vibrio crassostreae, a benign oyster colonizer turned into a pathogen after plasmid acquisition

The ISME Journal, 2017-04, Vol.11 (4), p.1043-1052 [Peer Reviewed Journal]

Copyright Nature Publishing Group Apr 2017 ;Distributed under a Creative Commons Attribution 4.0 International License ;Copyright © 2017 International Society for Microbial Ecology 2017 International Society for Microbial Ecology ;ISSN: 1751-7362 ;EISSN: 1751-7370 ;DOI: 10.1038/ismej.2016.162 ;PMID: 27922600

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17
Down to the bone: the role of overlooked endolithic microbiomes in reef coral health
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Article
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Down to the bone: the role of overlooked endolithic microbiomes in reef coral health

The ISME Journal, 2020-02, Vol.14 (2), p.325-334 [Peer Reviewed Journal]

This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;Distributed under a Creative Commons Attribution 4.0 International License ;The Author(s) 2019 ;ISSN: 1751-7362 ;EISSN: 1751-7370 ;DOI: 10.1038/s41396-019-0548-z ;PMID: 31690886

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18
Warming enhances old organic carbon decomposition through altering functional microbial communities
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Article
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Warming enhances old organic carbon decomposition through altering functional microbial communities

The ISME Journal, 2017-08, Vol.11 (8), p.1825-1835 [Peer Reviewed Journal]

Copyright Nature Publishing Group Aug 2017 ;Copyright © 2017 The Author(s) 2017 The Author(s) ;ISSN: 1751-7362 ;EISSN: 1751-7370 ;DOI: 10.1038/ismej.2017.48 ;PMID: 28430189

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19
Consistent host and organ occupancy of phyllosphere bacteria in a community of wild herbaceous plant species
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Article
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Consistent host and organ occupancy of phyllosphere bacteria in a community of wild herbaceous plant species

The ISME Journal, 2020-01, Vol.14 (1), p.245-258 [Peer Reviewed Journal]

2019. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;Distributed under a Creative Commons Attribution 4.0 International License ;The Author(s) 2019 ;ISSN: 1751-7362 ;EISSN: 1751-7370 ;DOI: 10.1038/s41396-019-0531-8 ;PMID: 31624344

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20
Metagenomics reveals sediment microbial community response to Deepwater Horizon oil spill
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Metagenomics reveals sediment microbial community response to Deepwater Horizon oil spill

The ISME Journal, 2014-07, Vol.8 (7), p.1464-1475 [Peer Reviewed Journal]

Copyright Nature Publishing Group Jul 2014 ;Copyright © 2014 International Society for Microbial Ecology 2014 International Society for Microbial Ecology ;ISSN: 1751-7362 ;EISSN: 1751-7370 ;DOI: 10.1038/ismej.2013.254 ;PMID: 24451203

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