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1 |
Material Type: Article
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Protein sequence design with a learned potentialNature communications, 2022-02, Vol.13 (1), p.746-746, Article 746 [Peer Reviewed Journal]2022. The Author(s). ;The Author(s) 2022. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2022 ;ISSN: 2041-1723 ;EISSN: 2041-1723 ;DOI: 10.1038/s41467-022-28313-9 ;PMID: 35136054Full text available |
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2 |
Material Type: Article
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Fast and sensitive taxonomic classification for metagenomics with KaijuNature communications, 2016-04, Vol.7 (1), p.11257-11257, Article 11257 [Peer Reviewed Journal]Copyright Nature Publishing Group Apr 2016 ;Copyright © 2016, Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. 2016 Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. ;ISSN: 2041-1723 ;EISSN: 2041-1723 ;DOI: 10.1038/ncomms11257 ;PMID: 27071849Full text available |
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3 |
Material Type: Article
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A crowdsourcing open platform for literature curation in UniProtPLoS biology, 2021-12, Vol.19 (12), p.e3001464-e3001464 [Peer Reviewed Journal]2021 Wang et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2021 Wang et al 2021 Wang et al ;ISSN: 1545-7885 ;ISSN: 1544-9173 ;EISSN: 1545-7885 ;DOI: 10.1371/journal.pbio.3001464 ;PMID: 34871295Full text available |
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4 |
Material Type: Article
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ECNet is an evolutionary context-integrated deep learning framework for protein engineeringNature communications, 2021-09, Vol.12 (1), p.5743-14, Article 5743 [Peer Reviewed Journal]2021. The Author(s). ;The Author(s) 2021. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2021 ;ISSN: 2041-1723 ;EISSN: 2041-1723 ;DOI: 10.1038/s41467-021-25976-8 ;PMID: 34593817Full text available |
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5 |
Material Type: Article
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Accurately clustering biological sequences in linear time by relatedness sortingNature communications, 2024-04, Vol.15 (1), p.3047-3047 [Peer Reviewed Journal]2024. The Author(s). ;The Author(s) 2024. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2024 ;EISSN: 2041-1723 ;DOI: 10.1038/s41467-024-47371-9 ;PMID: 38589369Full text available |
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6 |
Material Type: Article
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ProtGPT2 is a deep unsupervised language model for protein designNature communications, 2022-07, Vol.13 (1), p.4348-4348, Article 4348 [Peer Reviewed Journal]The Author(s) 2022. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2022 ;ISSN: 2041-1723 ;EISSN: 2041-1723 ;DOI: 10.1038/s41467-022-32007-7 ;PMID: 35896542Full text available |
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7 |
Material Type: Article
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Publisher Correction: Thymosin α1 represents a potential potent single-molecule-based therapy for cystic fibrosisNature medicine, 2018-09, Vol.24 (9), p.1482-1482 [Peer Reviewed Journal]Copyright Nature Publishing Group Sep 2018 ;ISSN: 1078-8956 ;EISSN: 1546-170X ;DOI: 10.1038/s41591-018-0099-2 ;PMID: 29934535Full text available |
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8 |
Material Type: Article
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AMRFinderPlus and the Reference Gene Catalog facilitate examination of the genomic links among antimicrobial resistance, stress response, and virulenceScientific reports, 2021-06, Vol.11 (1), p.12728-12728, Article 12728 [Peer Reviewed Journal]This is a U.S. Government work and not under copyright protection in the US; foreign copyright protection may apply 2021. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;This is a U.S. Government work and not under copyright protection in the US; foreign copyright protection may apply 2021 ;ISSN: 2045-2322 ;EISSN: 2045-2322 ;DOI: 10.1038/s41598-021-91456-0 ;PMID: 34135355Full text available |
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9 |
Material Type: Article
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Dimers of DNA-PK create a stage for DNA double-strand break repairNature structural & molecular biology, 2021-01, Vol.28 (1), p.13-19 [Peer Reviewed Journal]The Author(s), under exclusive licence to Springer Nature America, Inc. 2020. ;ISSN: 1545-9993 ;EISSN: 1545-9985 ;DOI: 10.1038/s41594-020-00517-x ;PMID: 33077952Full text available |
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10 |
Material Type: Article
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Sensitive protein alignments at tree-of-life scale using DIAMONDNature methods, 2021-04, Vol.18 (4), p.366-368 [Peer Reviewed Journal]COPYRIGHT 2021 Nature Publishing Group ;The Author(s) 2021. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2021 ;ISSN: 1548-7091 ;EISSN: 1548-7105 ;DOI: 10.1038/s41592-021-01101-x ;PMID: 33828273Full text available |
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11 |
Material Type: Article
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Improved protein structure prediction using potentials from deep learningNature (London), 2020-01, Vol.577 (7792), p.706-710 [Peer Reviewed Journal]COPYRIGHT 2020 Nature Publishing Group ;COPYRIGHT 2020 Nature Publishing Group ;Copyright Nature Publishing Group Jan 30, 2020 ;ISSN: 0028-0836 ;EISSN: 1476-4687 ;DOI: 10.1038/s41586-019-1923-7 ;PMID: 31942072Full text available |
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12 |
Material Type: Article
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Highly accurate protein structure prediction with AlphaFoldNature (London), 2021-08, Vol.596 (7873), p.583-589 [Peer Reviewed Journal]2021. The Author(s). ;COPYRIGHT 2021 Nature Publishing Group ;Copyright Nature Publishing Group Aug 26, 2021 ;The Author(s) 2021 ;ISSN: 0028-0836 ;EISSN: 1476-4687 ;DOI: 10.1038/s41586-021-03819-2 ;PMID: 34265844Full text available |
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13 |
Material Type: Article
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Active Site Flexibility as a Hallmark for Efficient PET Degradation by I. sakaiensis PETaseBiophysical journal, 2018-03, Vol.114 (6), p.1302-1312 [Peer Reviewed Journal]2018 Biophysical Society ;Copyright © 2018 Biophysical Society. Published by Elsevier Inc. All rights reserved. ;2018 Biophysical Society. 2018 Biophysical Society ;ISSN: 0006-3495 ;EISSN: 1542-0086 ;DOI: 10.1016/j.bpj.2018.02.005 ;PMID: 29590588Full text available |
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14 |
Material Type: Article
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Deciphering how naturally occurring sequence features impact the phase behaviours of disordered prion-like domainsNature chemistry, 2022-02, Vol.14 (2), p.196-207 [Peer Reviewed Journal]2021. The Author(s), under exclusive licence to Springer Nature Limited. ;The Author(s), under exclusive licence to Springer Nature Limited 2021. ;ISSN: 1755-4330 ;EISSN: 1755-4349 ;DOI: 10.1038/s41557-021-00840-w ;PMID: 34931046Full text available |
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15 |
Material Type: Article
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HydDB: A web tool for hydrogenase classification and analysisScientific reports, 2016-09, Vol.6 (1), p.34212-34212, Article 34212 [Peer Reviewed Journal]Copyright Nature Publishing Group Sep 2016 ;Copyright © 2016, The Author(s) 2016 The Author(s) ;ISSN: 2045-2322 ;EISSN: 2045-2322 ;DOI: 10.1038/srep34212 ;PMID: 27670643Full text available |
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16 |
Material Type: Article
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Unified rational protein engineering with sequence-based deep representation learningNature methods, 2019-12, Vol.16 (12), p.1315-1322 [Peer Reviewed Journal]COPYRIGHT 2019 Nature Publishing Group ;Copyright Nature Publishing Group Dec 2019 ;ISSN: 1548-7091 ;EISSN: 1548-7105 ;DOI: 10.1038/s41592-019-0598-1 ;PMID: 31636460Full text available |
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17 |
Material Type: Article
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A 3.8 Å resolution cryo-EM structure of a small protein bound to an imaging scaffoldNature communications, 2019-04, Vol.10 (1), p.1864-1864, Article 1864 [Peer Reviewed Journal]The Author(s) 2019. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2019 ;ISSN: 2041-1723 ;EISSN: 2041-1723 ;DOI: 10.1038/s41467-019-09836-0 ;PMID: 31015551Full text available |
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18 |
Material Type: Article
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Protein-level assembly increases protein sequence recovery from metagenomic samples manyfoldNature methods, 2019-07, Vol.16 (7), p.603-606 [Peer Reviewed Journal]COPYRIGHT 2019 Nature Publishing Group ;Copyright Nature Publishing Group Jul 2019 ;ISSN: 1548-7091 ;EISSN: 1548-7105 ;DOI: 10.1038/s41592-019-0437-4 ;PMID: 31235882Full text available |
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19 |
Material Type: Article
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Machine-learning-guided directed evolution for protein engineeringNature methods, 2019-08, Vol.16 (8), p.687-694 [Peer Reviewed Journal]COPYRIGHT 2019 Nature Publishing Group ;Copyright Nature Publishing Group Aug 2019 ;ISSN: 1548-7091 ;EISSN: 1548-7105 ;DOI: 10.1038/s41592-019-0496-6 ;PMID: 31308553Full text available |
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20 |
Material Type: Article
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SignalP 5.0 improves signal peptide predictions using deep neural networksNature biotechnology, 2019-04, Vol.37 (4), p.420-423 [Peer Reviewed Journal]2019© The Author(s), under exclusive licence to Springer Nature America, Inc. 2019 ;ISSN: 1087-0156 ;ISSN: 1546-1696 ;EISSN: 1546-1696 ;DOI: 10.1038/s41587-019-0036-z ;PMID: 30778233Full text available |