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1
R-Loops Promote Antisense Transcription across the Mammalian Genome
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Article
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R-Loops Promote Antisense Transcription across the Mammalian Genome

Molecular cell, 2019-11, Vol.76 (4), p.600-616.e6 [Peer Reviewed Journal]

2019 The Author(s) ;Copyright © 2019 The Author(s). Published by Elsevier Inc. All rights reserved. ;2019 The Author(s) 2019 ;ISSN: 1097-2765 ;EISSN: 1097-4164 ;DOI: 10.1016/j.molcel.2019.10.002 ;PMID: 31679819

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2
Accurate Proteome-wide Label-free Quantification by Delayed Normalization and Maximal Peptide Ratio Extraction, Termed MaxLFQ
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Article
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Accurate Proteome-wide Label-free Quantification by Delayed Normalization and Maximal Peptide Ratio Extraction, Termed MaxLFQ

Molecular & cellular proteomics, 2014-09, Vol.13 (9), p.2513-2526 [Peer Reviewed Journal]

2014 © 2014 ASBMB. Currently published by Elsevier Inc; originally published by American Society for Biochemistry and Molecular Biology. ;2014 by The American Society for Biochemistry and Molecular Biology, Inc. ;2014 by The American Society for Biochemistry and Molecular Biology, Inc. 2014 ;ISSN: 1535-9476 ;EISSN: 1535-9484 ;DOI: 10.1074/mcp.M113.031591 ;PMID: 24942700

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3
DIA-NN: neural networks and interference correction enable deep proteome coverage in high throughput
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DIA-NN: neural networks and interference correction enable deep proteome coverage in high throughput

Nature methods, 2020-01, Vol.17 (1), p.41-44 [Peer Reviewed Journal]

COPYRIGHT 2020 Nature Publishing Group ;Copyright Nature Publishing Group Jan 2020 ;ISSN: 1548-7091 ;EISSN: 1548-7105 ;DOI: 10.1038/s41592-019-0638-x ;PMID: 31768060

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4
Increased demand for NAD+ relative to ATP drives aerobic glycolysis
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Increased demand for NAD+ relative to ATP drives aerobic glycolysis

Molecular cell, 2021-02, Vol.81 (4), p.691-707.e6 [Peer Reviewed Journal]

2020 The Authors ;Copyright © 2020 The Authors. Published by Elsevier Inc. All rights reserved. ;ISSN: 1097-2765 ;ISSN: 1097-4164 ;EISSN: 1097-4164 ;DOI: 10.1016/j.molcel.2020.12.012 ;PMID: 33382985

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5
Friend or foe—Post-translational modifications as regulators of phase separation and RNP granule dynamics
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Friend or foe—Post-translational modifications as regulators of phase separation and RNP granule dynamics

The Journal of biological chemistry, 2019-05, Vol.294 (18), p.7137-7150 [Peer Reviewed Journal]

2019 © 2019 Hofweber and Dormann. ;2019 Hofweber and Dormann. ;2019 Hofweber and Dormann. 2019 Hofweber and Dormann. ;ISSN: 0021-9258 ;EISSN: 1083-351X ;DOI: 10.1074/jbc.TM118.001189 ;PMID: 30587571

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6
ORF3a of the COVID-19 virus SARS-CoV-2 blocks HOPS complex-mediated assembly of the SNARE complex required for autolysosome formation
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Article
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ORF3a of the COVID-19 virus SARS-CoV-2 blocks HOPS complex-mediated assembly of the SNARE complex required for autolysosome formation

Developmental Cell, 2021-02, Vol.56 (4), p.427-442.e5 [Peer Reviewed Journal]

2020 Elsevier Inc. ;Copyright © 2020 Elsevier Inc. All rights reserved. ;COPYRIGHT 2021 Elsevier B.V. ;2020. Not withstanding the ProQuest Terms and Conditions, you may use this content in accordance with the associated terms available at https://www.elsevier.com/legal/elsevier-website-terms-and-conditions ;2020 Elsevier Inc. 2020 Elsevier Inc. ;ISSN: 1534-5807 ;EISSN: 1878-1551 ;DOI: 10.1016/j.devcel.2020.12.010 ;PMID: 33422265

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7
The PINK1-PARKIN Mitochondrial Ubiquitylation Pathway Drives a Program of OPTN/NDP52 Recruitment and TBK1 Activation to Promote Mitophagy
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The PINK1-PARKIN Mitochondrial Ubiquitylation Pathway Drives a Program of OPTN/NDP52 Recruitment and TBK1 Activation to Promote Mitophagy

Molecular cell, 2015-10, Vol.60 (1), p.7-20 [Peer Reviewed Journal]

2015 Elsevier Inc. ;Copyright © 2015 Elsevier Inc. All rights reserved. ;ISSN: 1097-2765 ;EISSN: 1097-4164 ;DOI: 10.1016/j.molcel.2015.08.016 ;PMID: 26365381

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8
A METTL3-METTL14 complex mediates mammalian nuclear RNA N6-adenosine methylation
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Article
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A METTL3-METTL14 complex mediates mammalian nuclear RNA N6-adenosine methylation

Nature chemical biology, 2014-02, Vol.10 (2), p.93-95 [Peer Reviewed Journal]

Copyright Nature Publishing Group Feb 2014 ;ISSN: 1552-4450 ;EISSN: 1552-4469 ;DOI: 10.1038/nchembio.1432 ;PMID: 24316715

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9
Content-aware image restoration: pushing the limits of fluorescence microscopy
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Content-aware image restoration: pushing the limits of fluorescence microscopy

Nature methods, 2018-12, Vol.15 (12), p.1090-1097 [Peer Reviewed Journal]

COPYRIGHT 2018 Nature Publishing Group ;Copyright Nature Publishing Group Dec 2018 ;ISSN: 1548-7091 ;EISSN: 1548-7105 ;DOI: 10.1038/s41592-018-0216-7 ;PMID: 30478326

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10
BoxCar acquisition method enables single-shot proteomics at a depth of 10,000 proteins in 100 minutes
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BoxCar acquisition method enables single-shot proteomics at a depth of 10,000 proteins in 100 minutes

Nature methods, 2018-06, Vol.15 (6), p.440-448 [Peer Reviewed Journal]

COPYRIGHT 2018 Nature Publishing Group ;Copyright Nature Publishing Group Jun 2018 ;ISSN: 1548-7091 ;EISSN: 1548-7105 ;DOI: 10.1038/s41592-018-0003-5 ;PMID: 29735998

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11
P-Body Purification Reveals the Condensation of Repressed mRNA Regulons
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Article
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P-Body Purification Reveals the Condensation of Repressed mRNA Regulons

Molecular cell, 2017-10, Vol.68 (1), p.144-157.e5 [Peer Reviewed Journal]

2017 Elsevier Inc. ;Copyright © 2017 Elsevier Inc. All rights reserved. ;Distributed under a Creative Commons Attribution 4.0 International License ;ISSN: 1097-2765 ;EISSN: 1097-4164 ;DOI: 10.1016/j.molcel.2017.09.003 ;PMID: 28965817

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12
Minimal, encapsulated proteomic-sample processing applied to copy-number estimation in eukaryotic cells
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Article
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Minimal, encapsulated proteomic-sample processing applied to copy-number estimation in eukaryotic cells

Nature methods, 2014-03, Vol.11 (3), p.319-324 [Peer Reviewed Journal]

COPYRIGHT 2014 Nature Publishing Group ;Copyright Nature Publishing Group Mar 2014 ;ISSN: 1548-7091 ;EISSN: 1548-7105 ;DOI: 10.1038/nmeth.2834 ;PMID: 24487582

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13
Membrane Damage during Ferroptosis Is Caused by Oxidation of Phospholipids Catalyzed by the Oxidoreductases POR and CYB5R1
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Article
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Membrane Damage during Ferroptosis Is Caused by Oxidation of Phospholipids Catalyzed by the Oxidoreductases POR and CYB5R1

Molecular cell, 2021-01, Vol.81 (2), p.355-369.e10 [Peer Reviewed Journal]

2020 Elsevier Inc. ;Copyright © 2020 Elsevier Inc. All rights reserved. ;ISSN: 1097-2765 ;EISSN: 1097-4164 ;DOI: 10.1016/j.molcel.2020.11.024 ;PMID: 33321093

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14
MS3 eliminates ratio distortion in isobaric multiplexed quantitative proteomics
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Article
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MS3 eliminates ratio distortion in isobaric multiplexed quantitative proteomics

Nature methods, 2011-11, Vol.8 (11), p.937-940 [Peer Reviewed Journal]

COPYRIGHT 2011 Nature Publishing Group ;Copyright Nature Publishing Group Nov 2011 ;ISSN: 1548-7091 ;EISSN: 1548-7105 ;DOI: 10.1038/nmeth.1714 ;PMID: 21963607

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15
STING directly activates autophagy to tune the innate immune response
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STING directly activates autophagy to tune the innate immune response

Cell death and differentiation, 2019-09, Vol.26 (9), p.1735-1749 [Peer Reviewed Journal]

Copyright Nature Publishing Group Sep 2019 ;ADMC Associazione Differenziamento e Morte Cellulare 2018 ;ISSN: 1350-9047 ;EISSN: 1476-5403 ;DOI: 10.1038/s41418-018-0251-z ;PMID: 30568238

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16
Sequence Determinants of Intracellular Phase Separation by Complex Coacervation of a Disordered Protein
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Article
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Sequence Determinants of Intracellular Phase Separation by Complex Coacervation of a Disordered Protein

Molecular cell, 2016-07, Vol.63 (1), p.72-85 [Peer Reviewed Journal]

2016 Elsevier Inc. ;Copyright © 2016 Elsevier Inc. All rights reserved. ;ISSN: 1097-2765 ;EISSN: 1097-4164 ;DOI: 10.1016/j.molcel.2016.05.042 ;PMID: 27392146

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17
RNA 5-Methylcytosine Facilitates the Maternal-to-Zygotic Transition by Preventing Maternal mRNA Decay
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Article
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RNA 5-Methylcytosine Facilitates the Maternal-to-Zygotic Transition by Preventing Maternal mRNA Decay

Molecular cell, 2019-09, Vol.75 (6), p.1188-1202.e11 [Peer Reviewed Journal]

2019 Elsevier Inc. ;Copyright © 2019 Elsevier Inc. All rights reserved. ;ISSN: 1097-2765 ;EISSN: 1097-4164 ;DOI: 10.1016/j.molcel.2019.06.033 ;PMID: 31399345

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18
Deacetylation of Nuclear LC3 Drives Autophagy Initiation under Starvation
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Article
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Deacetylation of Nuclear LC3 Drives Autophagy Initiation under Starvation

Molecular cell, 2015-02, Vol.57 (3), p.456-466 [Peer Reviewed Journal]

2015 Elsevier Inc. ;Copyright © 2015 Elsevier Inc. All rights reserved. ;ISSN: 1097-2765 ;EISSN: 1097-4164 ;DOI: 10.1016/j.molcel.2014.12.013 ;PMID: 25601754

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19
A general method to improve fluorophores for live-cell and single-molecule microscopy
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Article
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A general method to improve fluorophores for live-cell and single-molecule microscopy

Nature methods, 2015-03, Vol.12 (3), p.244-250 [Peer Reviewed Journal]

COPYRIGHT 2015 Nature Publishing Group ;Copyright Nature Publishing Group Mar 2015 ;ISSN: 1548-7091 ;EISSN: 1548-7105 ;DOI: 10.1038/nmeth.3256 ;PMID: 25599551

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20
Quantitative Proteomics Reveal a Feedforward Mechanism for Mitochondrial PARKIN Translocation and Ubiquitin Chain Synthesis
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Article
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Quantitative Proteomics Reveal a Feedforward Mechanism for Mitochondrial PARKIN Translocation and Ubiquitin Chain Synthesis

Molecular cell, 2014-11, Vol.56 (3), p.360-375 [Peer Reviewed Journal]

2014 Elsevier Inc. ;Copyright © 2014 Elsevier Inc. All rights reserved. ;ISSN: 1097-2765 ;EISSN: 1097-4164 ;DOI: 10.1016/j.molcel.2014.09.007 ;PMID: 25284222

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