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1
Accurately clustering biological sequences in linear time by relatedness sorting
Accurately clustering biological sequences in linear time by relatedness sorting
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Accurately clustering biological sequences in linear time by relatedness sorting

Nature communications, 2024-04, Vol.15 (1), p.3047-3047 [Peer Reviewed Journal]

2024. The Author(s). ;The Author(s) 2024. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2024 ;EISSN: 2041-1723 ;DOI: 10.1038/s41467-024-47371-9 ;PMID: 38589369

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2
Cryo-EM structures of type IV pili complexed with nanobodies reveal immune escape mechanisms
Cryo-EM structures of type IV pili complexed with nanobodies reveal immune escape mechanisms
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Cryo-EM structures of type IV pili complexed with nanobodies reveal immune escape mechanisms

Nature communications, 2024-03, Vol.15 (1), p.2414-2414 [Peer Reviewed Journal]

2024. The Author(s). ;The Author(s) 2024. corrected publication 2024. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;Attribution ;The Author(s) 2024 ;ISSN: 2041-1723 ;EISSN: 2041-1723 ;DOI: 10.1038/s41467-024-46677-y ;PMID: 38499587

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3
Genetic and functional diversity of β-N-acetylgalactosamine-targeting glycosidases expanded by deep-sea metagenome analysis
Genetic and functional diversity of β-N-acetylgalactosamine-targeting glycosidases expanded by deep-sea metagenome analysis
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Genetic and functional diversity of β-N-acetylgalactosamine-targeting glycosidases expanded by deep-sea metagenome analysis

Nature communications, 2024-05, Vol.15 (1), p.3543-3543 [Peer Reviewed Journal]

2024. The Author(s). ;The Author(s) 2024. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;EISSN: 2041-1723 ;DOI: 10.1038/s41467-024-47653-2 ;PMID: 38730244

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4
Protein feature engineering framework for AMPylation site prediction
Protein feature engineering framework for AMPylation site prediction
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Protein feature engineering framework for AMPylation site prediction

Scientific reports, 2024-04, Vol.14 (1), p.8695-8695 [Peer Reviewed Journal]

2024. The Author(s). ;The Author(s) 2024. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;EISSN: 2045-2322 ;DOI: 10.1038/s41598-024-58450-8 ;PMID: 38622194

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5
Using protein language models for protein interaction hot spot prediction with limited data
Using protein language models for protein interaction hot spot prediction with limited data
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Using protein language models for protein interaction hot spot prediction with limited data

BMC bioinformatics, 2024-03, Vol.25 (1), p.115-115 [Peer Reviewed Journal]

2024. The Author(s). ;2024. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;EISSN: 1471-2105 ;DOI: 10.1186/s12859-024-05737-2 ;PMID: 38493120

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6
Disordered clock protein interactions and charge blocks turn an hourglass into a persistent circadian oscillator
Disordered clock protein interactions and charge blocks turn an hourglass into a persistent circadian oscillator
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Disordered clock protein interactions and charge blocks turn an hourglass into a persistent circadian oscillator

Nature communications, 2024-04, Vol.15 (1), p.3523-3523 [Peer Reviewed Journal]

2024. The Author(s). ;The Author(s) 2024. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;EISSN: 2041-1723 ;DOI: 10.1038/s41467-024-47761-z ;PMID: 38664421

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7
Cymric, a Maternal and Zygotic HTK-16-Like SHARK Family Tyrosine Kinase Gene, Is Disrupted in Molgula occulta, a Tailless Ascidian
Cymric, a Maternal and Zygotic HTK-16-Like SHARK Family Tyrosine Kinase Gene, Is Disrupted in Molgula occulta, a Tailless Ascidian
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Cymric, a Maternal and Zygotic HTK-16-Like SHARK Family Tyrosine Kinase Gene, Is Disrupted in Molgula occulta, a Tailless Ascidian

The Biological bulletin (Lancaster), 2023-08, Vol.245 (1), p.1-8 [Peer Reviewed Journal]

2024 The University of Chicago. All rights reserved. ;Copyright University of Chicago Press Aug 2023 ;ISSN: 0006-3185 ;EISSN: 1939-8697 ;DOI: 10.1086/730536 ;PMID: 38820291

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8
Conformations of a highly expressed Z19 α-zein studied with AlphaFold2 and MD simulations
Conformations of a highly expressed Z19 α-zein studied with AlphaFold2 and MD simulations
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Conformations of a highly expressed Z19 α-zein studied with AlphaFold2 and MD simulations

PloS one, 2024, Vol.19 (5), p.e0293786-e0293786 [Peer Reviewed Journal]

Copyright: © 2024 Niels Johan Christensen. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. ;2024 Niels Johan Christensen 2024 Niels Johan Christensen ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0293786 ;PMID: 38718010

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9
Understanding the genetic sex-determining mechanism in Hyla eximia treefrog inferred from H-Y antigen
Understanding the genetic sex-determining mechanism in Hyla eximia treefrog inferred from H-Y antigen
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Understanding the genetic sex-determining mechanism in Hyla eximia treefrog inferred from H-Y antigen

PloS one, 2024-05, Vol.19 (5), p.e0304554-e0304554 [Peer Reviewed Journal]

Copyright: © 2024 Ruiz et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. ;COPYRIGHT 2024 Public Library of Science ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0304554 ;PMID: 38820287

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10
Structural analysis of a U-superfamily conotoxin containing a mini-granulin fold: Insights into key features that distinguish between the ICK and granulin folds
Structural analysis of a U-superfamily conotoxin containing a mini-granulin fold: Insights into key features that distinguish between the ICK and granulin folds
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Structural analysis of a U-superfamily conotoxin containing a mini-granulin fold: Insights into key features that distinguish between the ICK and granulin folds

The Journal of biological chemistry, 2024-04, Vol.300 (4), p.107203-107203, Article 107203 [Peer Reviewed Journal]

2024 The Authors ;Copyright © 2024 The Authors. Published by Elsevier Inc. All rights reserved. ;2024 The Authors 2024 ;ISSN: 0021-9258 ;EISSN: 1083-351X ;DOI: 10.1016/j.jbc.2024.107203 ;PMID: 38508311

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11
Solution structure and pressure response of thioredoxin-1 of Plasmodium falciparum
Solution structure and pressure response of thioredoxin-1 of Plasmodium falciparum
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Solution structure and pressure response of thioredoxin-1 of Plasmodium falciparum

PloS one, 2024-04, Vol.19 (4), p.e0301579-e0301579 [Peer Reviewed Journal]

Copyright: © 2024 Munte, Kalbitzer. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. ;COPYRIGHT 2024 Public Library of Science ;2024 Munte, Kalbitzer 2024 Munte, Kalbitzer ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0301579 ;PMID: 38635664

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12
A trimeric glycosylated GH45 cellulase from the red abalone (Haliotis rufescens) exhibits endo and exoactivity
A trimeric glycosylated GH45 cellulase from the red abalone (Haliotis rufescens) exhibits endo and exoactivity
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A trimeric glycosylated GH45 cellulase from the red abalone (Haliotis rufescens) exhibits endo and exoactivity

PloS one, 2024-04, Vol.19 (4), p.e0301604-e0301604 [Peer Reviewed Journal]

Copyright: © 2024 Hernández-Benítez et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. ;COPYRIGHT 2024 Public Library of Science ;2024 Hernández-Benítez et al 2024 Hernández-Benítez et al ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0301604 ;PMID: 38635649

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13
Discovery of Borosin Catalytic Strategies and Function through Bioinformatic Profiling
Discovery of Borosin Catalytic Strategies and Function through Bioinformatic Profiling
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Discovery of Borosin Catalytic Strategies and Function through Bioinformatic Profiling

ACS chemical biology, 2024-05, Vol.19 (5), p.1116-1124 [Peer Reviewed Journal]

2024 American Chemical Society ;ISSN: 1554-8929 ;EISSN: 1554-8937 ;DOI: 10.1021/acschembio.4c00066 ;PMID: 38695893

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14
In Vitro Characterization of an O‑Specific Glycosyltransferase Involved in Flagellin Glycosylation
In Vitro Characterization of an O‑Specific Glycosyltransferase Involved in Flagellin Glycosylation
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In Vitro Characterization of an O‑Specific Glycosyltransferase Involved in Flagellin Glycosylation

ACS chemical biology, 2024-04, Vol.19 (4), p.992-998 [Peer Reviewed Journal]

2024 American Chemical Society ;ISSN: 1554-8929 ;EISSN: 1554-8937 ;DOI: 10.1021/acschembio.4c00045 ;PMID: 38562012

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15
The genetic landscape of a metabolic interaction
The genetic landscape of a metabolic interaction
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The genetic landscape of a metabolic interaction

Nature communications, 2024-04, Vol.15 (1), p.3351-3351 [Peer Reviewed Journal]

2024. The Author(s). ;The Author(s) 2024. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;EISSN: 2041-1723 ;DOI: 10.1038/s41467-024-47671-0 ;PMID: 38637543

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16
The rise of taxon-specific epitope predictors
The rise of taxon-specific epitope predictors
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The rise of taxon-specific epitope predictors

Briefings in bioinformatics, 2024-03, Vol.25 (2) [Peer Reviewed Journal]

The Author(s) 2024. Published by Oxford University Press. 2024 ;ISSN: 1467-5463 ;EISSN: 1477-4054 ;DOI: 10.1093/bib/bbae092

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17
The overlooked evolutionary dynamics of 16S rRNA revises its role as the "gold standard" for bacterial species identification
The overlooked evolutionary dynamics of 16S rRNA revises its role as the "gold standard" for bacterial species identification
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The overlooked evolutionary dynamics of 16S rRNA revises its role as the "gold standard" for bacterial species identification

Scientific reports, 2024-04, Vol.14 (1), p.9067-9067 [Peer Reviewed Journal]

2024. The Author(s). ;The Author(s) 2024. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2024 ;EISSN: 2045-2322 ;DOI: 10.1038/s41598-024-59667-3 ;PMID: 38643216

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18
Enhancing missense variant pathogenicity prediction with protein language models using VariPred
Enhancing missense variant pathogenicity prediction with protein language models using VariPred
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Enhancing missense variant pathogenicity prediction with protein language models using VariPred

Scientific reports, 2024-04, Vol.14 (1), p.8136-8136 [Peer Reviewed Journal]

2024. Crown. ;Crown 2024. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;Crown 2024 ;EISSN: 2045-2322 ;DOI: 10.1038/s41598-024-51489-7 ;PMID: 38584172

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19
GEFormerDTA: drug target affinity prediction based on transformer graph for early fusion
GEFormerDTA: drug target affinity prediction based on transformer graph for early fusion
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GEFormerDTA: drug target affinity prediction based on transformer graph for early fusion

Scientific reports, 2024-03, Vol.14 (1), p.7416-7416 [Peer Reviewed Journal]

2024. The Author(s). ;The Author(s) 2024. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;EISSN: 2045-2322 ;DOI: 10.1038/s41598-024-57879-1 ;PMID: 38548825

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20
The α subunit of AMP‐activated protein kinase is critical for the metabolic success and tachyzoite proliferation of Toxoplasma gondii
The α subunit of AMP‐activated protein kinase is critical for the metabolic success and tachyzoite proliferation of Toxoplasma gondii
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The α subunit of AMP‐activated protein kinase is critical for the metabolic success and tachyzoite proliferation of Toxoplasma gondii

Microbial biotechnology, 2024-04, Vol.17 (4), p.e14455-n/a [Peer Reviewed Journal]

2024 The Authors. published by John Wiley & Sons Ltd. ;2024 The Authors. Microbial Biotechnology published by John Wiley & Sons Ltd. ;2024. This work is published under http://creativecommons.org/licenses/by-nc/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;ISSN: 1751-7915 ;EISSN: 1751-7915 ;DOI: 10.1111/1751-7915.14455 ;PMID: 38635138

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