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1
Alignment-free genome comparison with feature frequency profiles (FFP) and optimal resolutions
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Alignment-free genome comparison with feature frequency profiles (FFP) and optimal resolutions

Proceedings of the National Academy of Sciences - PNAS, 2009-02, Vol.106 (8), p.2677-2682 [Peer Reviewed Journal]

Copyright National Academy of Sciences Feb 24, 2009 ;2009 by The National Academy of Sciences of the USA ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.0813249106 ;PMID: 19188606

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2
The new W family reconstructs the evolution of MHC genes
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The new W family reconstructs the evolution of MHC genes

Proceedings of the National Academy of Sciences - PNAS, 2022-02, Vol.119 (5) [Peer Reviewed Journal]

Copyright National Academy of Sciences Feb 1, 2022 ;Copyright © 2022 the Author(s). Published by PNAS. 2022 ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.2122079119 ;PMID: 35074884

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3
A genome Tree of Life for the Fungi kingdom
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A genome Tree of Life for the Fungi kingdom

Proceedings of the National Academy of Sciences - PNAS, 2017-08, Vol.114 (35), p.9391-9396 [Peer Reviewed Journal]

Volumes 1–89 and 106–114, copyright as a collective work only; author(s) retains copyright to individual articles ;Copyright National Academy of Sciences Aug 29, 2017 ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.1711939114 ;PMID: 28808018

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4
Scaphopoda is the sister taxon to Bivalvia: Evidence of ancient incomplete lineage sorting
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Scaphopoda is the sister taxon to Bivalvia: Evidence of ancient incomplete lineage sorting

Proceedings of the National Academy of Sciences - PNAS, 2023-10, Vol.120 (40), p.e2302361120-e2302361120 [Peer Reviewed Journal]

Copyright © 2023 the Author(s). Published by PNAS. 2023 ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.2302361120 ;PMID: 37738291

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5
The avocado genome informs deep angiosperm phylogeny, highlights introgressive hybridization, and reveals pathogen-influenced gene space adaptation
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The avocado genome informs deep angiosperm phylogeny, highlights introgressive hybridization, and reveals pathogen-influenced gene space adaptation

Proceedings of the National Academy of Sciences - PNAS, 2019-08, Vol.116 (34), p.17081-17089 [Peer Reviewed Journal]

Copyright © 2019 the Author(s). Published by PNAS. ;Copyright National Academy of Sciences Aug 20, 2019 ;Copyright © 2019 the Author(s). Published by PNAS. 2019 ;ISSN: 0027-8424 ;ISSN: 1091-6490 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.1822129116 ;PMID: 31387975

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6
butterfly plant arms-race escalated by gene and genome duplications
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butterfly plant arms-race escalated by gene and genome duplications

Proceedings of the National Academy of Sciences - PNAS, 2015-07, Vol.112 (27), p.8362-8366 [Peer Reviewed Journal]

Volumes 1–89 and 106–112, copyright as a collective work only; author(s) retains copyright to individual articles ;Copyright National Academy of Sciences Jul 7, 2015 ;Wageningen University & Research ;ISSN: 0027-8424 ;ISSN: 1091-6490 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.1503926112 ;PMID: 26100883

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7
two-domain tree of life is linked to a new root for the Archaea
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two-domain tree of life is linked to a new root for the Archaea

Proceedings of the National Academy of Sciences - PNAS, 2015-05, Vol.112 (21), p.6670-6675 [Peer Reviewed Journal]

Volumes 1–89 and 106–112, copyright as a collective work only; author(s) retains copyright to individual articles ;Copyright National Academy of Sciences May 26, 2015 ;Distributed under a Creative Commons Attribution 4.0 International License ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.1420858112 ;PMID: 25964353

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8
Synthesis of phylogeny and taxonomy into a comprehensive tree of life
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Synthesis of phylogeny and taxonomy into a comprehensive tree of life

Proceedings of the National Academy of Sciences - PNAS, 2015-10, Vol.112 (41), p.12764-12769 [Peer Reviewed Journal]

Volumes 1–89 and 106–112, copyright as a collective work only; author(s) retains copyright to individual articles ;Copyright National Academy of Sciences Oct 13, 2015 ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.1423041112 ;PMID: 26385966

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9
Bacterial proteins pinpoint a single eukaryotic root
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Bacterial proteins pinpoint a single eukaryotic root

Proceedings of the National Academy of Sciences - PNAS, 2015-02, Vol.112 (7), p.E693-E699 [Peer Reviewed Journal]

Volumes 1–89 and 106–112, copyright as a collective work only; author(s) retains copyright to individual articles ;Copyright National Academy of Sciences Feb 17, 2015 ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.1420657112 ;PMID: 25646484

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10
Defining and quantifying the core microbiome: Challenges and prospects
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Defining and quantifying the core microbiome: Challenges and prospects

Proceedings of the National Academy of Sciences - PNAS, 2021-12, Vol.118 (51) [Peer Reviewed Journal]

Copyright National Academy of Sciences Dec 21, 2021 ;2021 ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.2104429118 ;PMID: 34862327

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11
Correction for Slik et al., Phylogenetic classification of the world's tropical forests
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Correction for Slik et al., Phylogenetic classification of the world's tropical forests

Proceedings of the National Academy of Sciences - PNAS, 2018-03, Vol.115 (13), p.E3067-E3067 [Peer Reviewed Journal]

Copyright National Academy of Sciences Mar 27, 2018 ;2018 ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.1803346115 ;PMID: 29531029

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12
Sponge grade body fossil with cellular resolution dating 60 Myr before the Cambrian
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Article
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Sponge grade body fossil with cellular resolution dating 60 Myr before the Cambrian

Proceedings of the National Academy of Sciences - PNAS, 2015-03, Vol.112 (12), p.E1453-E1460 [Peer Reviewed Journal]

Volumes 1–89 and 106–112, copyright as a collective work only; author(s) retains copyright to individual articles ;Copyright National Academy of Sciences Mar 24, 2015 ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.1414577112 ;PMID: 25775601

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13
A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data
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A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data

Mycologia, 2016-09, Vol.108 (5), p.1028-1046 [Peer Reviewed Journal]

2016 by The Mycological Society of America 2016 ;2016 by The Mycological Society of America ;2016 by The Mycological Society of America. ;ISSN: 0027-5514 ;EISSN: 1557-2536 ;DOI: 10.3852/16-042 ;PMID: 27738200

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14
Whole-proteome phylogeny of prokaryotes by feature frequency profiles: An alignment-free method with optimal feature resolution
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Whole-proteome phylogeny of prokaryotes by feature frequency profiles: An alignment-free method with optimal feature resolution

Proceedings of the National Academy of Sciences - PNAS, 2010-01, Vol.107 (1), p.133-138 [Peer Reviewed Journal]

Copyright National Academy of Sciences Jan 5, 2010 ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.0913033107 ;PMID: 20018669

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15
Molecular phylogeny and evolution of inflorescence types in Eperua
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Article
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Molecular phylogeny and evolution of inflorescence types in Eperua

American journal of botany, 2023-10, Vol.110 (10) [Peer Reviewed Journal]

Attribution ;ISSN: 0002-9122 ;EISSN: 1537-2197 ;DOI: 10.1002/ajb2.16229

Digital Resources/Online E-Resources

16
Plant DNA barcodes and a community phylogeny of a tropical forest dynamics plot in Panama
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Plant DNA barcodes and a community phylogeny of a tropical forest dynamics plot in Panama

Proceedings of the National Academy of Sciences - PNAS, 2009-11, Vol.106 (44), p.18621-18626 [Peer Reviewed Journal]

Copyright National Academy of Sciences Nov 3, 2009 ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.0909820106 ;PMID: 19841276

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17
Scale-invariant topology and bursty branching of evolutionary trees emerge from niche construction
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Article
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Scale-invariant topology and bursty branching of evolutionary trees emerge from niche construction

Proceedings of the National Academy of Sciences - PNAS, 2020-04, Vol.117 (14), p.7879-7887 [Peer Reviewed Journal]

Copyright National Academy of Sciences Apr 7, 2020 ;2020 ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.1915088117 ;PMID: 32209672

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18
Human impacts on global freshwater fish biodiversity
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Article
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Human impacts on global freshwater fish biodiversity

Science (American Association for the Advancement of Science), 2021-02, Vol.371 (6531), p.835-838 [Peer Reviewed Journal]

Distributed under a Creative Commons Attribution 4.0 International License ;ISSN: 0036-8075 ;EISSN: 1095-9203 ;DOI: 10.1126/science.abd3369

Digital Resources/Online E-Resources

19
Reconciling molecular phylogenies with the fossil record
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Article
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Reconciling molecular phylogenies with the fossil record

Proceedings of the National Academy of Sciences - PNAS, 2011-09, Vol.108 (39), p.16327-16332 [Peer Reviewed Journal]

Copyright National Academy of Sciences Sep 27, 2011 ;Distributed under a Creative Commons Attribution 4.0 International License ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.1102543108 ;PMID: 21930899

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20
Glyphosate perturbs the gut microbiota of honey bees
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Article
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Glyphosate perturbs the gut microbiota of honey bees

Proceedings of the National Academy of Sciences - PNAS, 2018-10, Vol.115 (41), p.10305-10310 [Peer Reviewed Journal]

Volumes 1–89 and 106–115, copyright as a collective work only; author(s) retains copyright to individual articles ;Copyright © 2018 the Author(s). Published by PNAS. ;Copyright © 2018 the Author(s). Published by PNAS. 2018 ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.1803880115 ;PMID: 30249635

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