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1
Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement
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Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement

PloS one, 2014-11, Vol.9 (11), p.e112963-e112963 [Peer Reviewed Journal]

2014 Walker et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2014 Walker et al 2014 Walker et al ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0112963 ;PMID: 25409509

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2
A transposable element in a NAC gene is associated with drought tolerance in maize seedlings
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A transposable element in a NAC gene is associated with drought tolerance in maize seedlings

Nature communications, 2015-09, Vol.6 (1), p.8326-8326, Article 8326 [Peer Reviewed Journal]

Copyright Nature Publishing Group Sep 2015 ;Copyright © 2015, Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. 2015 Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. ;ISSN: 2041-1723 ;EISSN: 2041-1723 ;DOI: 10.1038/ncomms9326 ;PMID: 26387805

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3
DNA barcoding and metabarcoding of standardized samples reveal patterns of marine benthic diversity
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DNA barcoding and metabarcoding of standardized samples reveal patterns of marine benthic diversity

Proceedings of the National Academy of Sciences - PNAS, 2015-02, Vol.112 (7), p.2076-2081 [Peer Reviewed Journal]

Volumes 1–89 and 106–112, copyright as a collective work only; author(s) retains copyright to individual articles ;Copyright National Academy of Sciences Feb 17, 2015 ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.1424997112 ;PMID: 25646458

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4
Phylogenetic measures of biodiversity and neo- and paleo-endemism in Australian Acacia
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Phylogenetic measures of biodiversity and neo- and paleo-endemism in Australian Acacia

Nature communications, 2014-07, Vol.5 (1), p.4473-4473, Article 4473 [Peer Reviewed Journal]

Copyright Nature Publishing Group Jul 2014 ;ISSN: 2041-1723 ;EISSN: 2041-1723 ;DOI: 10.1038/ncomms5473 ;PMID: 25034856

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5
Boosting CRISPR/Cas9 multiplex editing capability with the endogenous tRNA-processing system
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Boosting CRISPR/Cas9 multiplex editing capability with the endogenous tRNA-processing system

Proceedings of the National Academy of Sciences - PNAS, 2015-03, Vol.112 (11), p.3570-3575 [Peer Reviewed Journal]

Volumes 1–89 and 106–112, copyright as a collective work only; author(s) retains copyright to individual articles ;Copyright National Academy of Sciences Mar 17, 2015 ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.1420294112 ;PMID: 25733849

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6
The Spirodela polyrhiza genome reveals insights into its neotenous reduction fast growth and aquatic lifestyle
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The Spirodela polyrhiza genome reveals insights into its neotenous reduction fast growth and aquatic lifestyle

Nature communications, 2014-02, Vol.5 (1), p.3311, Article 3311 [Peer Reviewed Journal]

Copyright Nature Publishing Group Feb 2014 ;Copyright © 2014, Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. 2014 Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. ;ISSN: 2041-1723 ;EISSN: 2041-1723 ;DOI: 10.1038/ncomms4311 ;PMID: 24548928

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7
Genome sequence of mungbean and insights into evolution within Vigna species
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Genome sequence of mungbean and insights into evolution within Vigna species

Nature communications, 2014-11, Vol.5 (1), p.5443-5443, Article 5443 [Peer Reviewed Journal]

Copyright Nature Publishing Group Nov 2014 ;Copyright © 2014, Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. 2014 Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. ;ISSN: 2041-1723 ;EISSN: 2041-1723 ;DOI: 10.1038/ncomms6443 ;PMID: 25384727

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8
MAFFT multiple sequence alignment software version 7: improvements in performance and usability
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MAFFT multiple sequence alignment software version 7: improvements in performance and usability

Molecular biology and evolution, 2013-04, Vol.30 (4), p.772-780 [Peer Reviewed Journal]

The Author 2013. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. 2013 ;ISSN: 0737-4038 ;EISSN: 1537-1719 ;DOI: 10.1093/molbev/mst010 ;PMID: 23329690

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9
Molecular evolution of Zika virus during its emergence in the 20(th) century
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Molecular evolution of Zika virus during its emergence in the 20(th) century

PLoS neglected tropical diseases, 2014, Vol.8 (1), p.e2636-e2636 [Peer Reviewed Journal]

ISSN: 1935-2727 ;EISSN: 1935-2735 ;DOI: 10.1371/journal.pntd.0002636 ;PMID: 24421913

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10
Translation rate is controlled by coupled trade-offs between site accessibility, selective RNA unfolding and sliding at upstream standby sites
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Translation rate is controlled by coupled trade-offs between site accessibility, selective RNA unfolding and sliding at upstream standby sites

Nucleic acids research, 2014-02, Vol.42 (4), p.2646-2659 [Peer Reviewed Journal]

The Author(s) 2013. Published by Oxford University Press. 2013 ;ISSN: 0305-1048 ;EISSN: 1362-4962 ;DOI: 10.1093/nar/gkt1139 ;PMID: 24234441

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11
Intestinal microbiota composition modulates choline bioavailability from diet and accumulation of the proatherogenic metabolite trimethylamine-N-oxide
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Intestinal microbiota composition modulates choline bioavailability from diet and accumulation of the proatherogenic metabolite trimethylamine-N-oxide

mBio, 2015-03, Vol.6 (2), p.e02481-e02481 [Peer Reviewed Journal]

Copyright © 2015 Romano et al. ;Copyright © 2015 Romano et al. 2015 Romano et al. ;ISSN: 2161-2129 ;EISSN: 2150-7511 ;DOI: 10.1128/mbio.02481-14 ;PMID: 25784704

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12
Short intronic repeat sequences facilitate circular RNA production
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Short intronic repeat sequences facilitate circular RNA production

Genes & development, 2014-10, Vol.28 (20), p.2233-2247 [Peer Reviewed Journal]

2014 Liang and Wilusz; Published by Cold Spring Harbor Laboratory Press. ;2014 ;ISSN: 0890-9369 ;EISSN: 1549-5477 ;DOI: 10.1101/gad.251926.114 ;PMID: 25281217

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13
Protter: interactive protein feature visualization and integration with experimental proteomic data
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Protter: interactive protein feature visualization and integration with experimental proteomic data

Bioinformatics, 2014-03, Vol.30 (6), p.884-886 [Peer Reviewed Journal]

ISSN: 1367-4803 ;EISSN: 1367-4811 ;EISSN: 1460-2059 ;DOI: 10.1093/bioinformatics/btt607 ;PMID: 24162465

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14
Bayesian phylogenetics with BEAUti and the BEAST 1.7
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Bayesian phylogenetics with BEAUti and the BEAST 1.7

Molecular biology and evolution, 2012-08, Vol.29 (8), p.1969-1973 [Peer Reviewed Journal]

Copyright Oxford Publishing Limited(England) Aug 2012 ;The Author(s) 2012. Published by Oxford University Press on behalf of the 2012 ;ISSN: 0737-4038 ;EISSN: 1537-1719 ;DOI: 10.1093/molbev/mss075 ;PMID: 22367748

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15
Optimized CRISPR/Cas tools for efficient germline and somatic genome engineering in Drosophila
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Optimized CRISPR/Cas tools for efficient germline and somatic genome engineering in Drosophila

Proceedings of the National Academy of Sciences - PNAS, 2014-07, Vol.111 (29), p.E2967-E2976 [Peer Reviewed Journal]

Copyright National Academy of Sciences Jul 22, 2014 ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.1405500111 ;PMID: 25002478

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16
Whole-genome sequencing of cultivated and wild peppers provides insights into Capsicum domestication and specialization
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Whole-genome sequencing of cultivated and wild peppers provides insights into Capsicum domestication and specialization

Proceedings of the National Academy of Sciences - PNAS, 2014-04, Vol.111 (14), p.5135-5140 [Peer Reviewed Journal]

copyright © 1993–2008 National Academy of Sciences of the United States of America ;Copyright National Academy of Sciences Apr 8, 2014 ;Distributed under a Creative Commons Attribution 4.0 International License ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.1400975111 ;PMID: 24591624

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17
Circular RNA profiling reveals an abundant circHIPK3 that regulates cell growth by sponging multiple miRNAs
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Circular RNA profiling reveals an abundant circHIPK3 that regulates cell growth by sponging multiple miRNAs

Nature communications, 2016-04, Vol.7 (1), p.11215-11215, Article 11215 [Peer Reviewed Journal]

Copyright Nature Publishing Group Apr 2016 ;Copyright © 2016, Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. 2016 Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. ;ISSN: 2041-1723 ;EISSN: 2041-1723 ;DOI: 10.1038/ncomms11215 ;PMID: 27050392

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18
Protein-Protein Docking: From Interaction to Interactome
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Protein-Protein Docking: From Interaction to Interactome

Biophysical journal, 2014-10, Vol.107 (8), p.1785-1793 [Peer Reviewed Journal]

2014 Biophysical Society ;Copyright Biophysical Society Oct 21, 2014 ;2014 by the Biophysical Society. 2014 Biophysical Society ;ISSN: 0006-3495 ;EISSN: 1542-0086 ;DOI: 10.1016/j.bpj.2014.08.033 ;PMID: 25418159

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19
Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi
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Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi

Proceedings of the National Academy of Sciences - PNAS, 2014-07, Vol.111 (27), p.9923-9928 [Peer Reviewed Journal]

copyright © 1993—2008 National Academy of Sciences of the United States of America ;Copyright National Academy of Sciences Jul 8, 2014 ;Distributed under a Creative Commons Attribution 4.0 International License ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.1400592111 ;PMID: 24958869

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20
Preserved genetic diversity in organoids cultured from biopsies of human colorectal cancer metastases
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Preserved genetic diversity in organoids cultured from biopsies of human colorectal cancer metastases

Proceedings of the National Academy of Sciences - PNAS, 2015-10, Vol.112 (43), p.13308-13311 [Peer Reviewed Journal]

Volumes 1–89 and 106–112, copyright as a collective work only; author(s) retains copyright to individual articles ;Copyright National Academy of Sciences Oct 27, 2015 ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.1516689112 ;PMID: 26460009

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