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1	Material Type: Article	Aboriginal artefacts on the continental shelf reveal ancient drowned cultural landscapes in northwest Australia PloS one, 2020-07, Vol.15 (7), p.e0233912 [Peer Reviewed Journal] COPYRIGHT 2020 Public Library of Science ;COPYRIGHT 2020 Public Library of Science ;2020 Benjamin et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2020 Benjamin et al 2020 Benjamin et al ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0233912 ;PMID: 32609779 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
2	Material Type: Article	Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads PLoS computational biology, 2017-06, Vol.13 (6), p.e1005595-e1005595 [Peer Reviewed Journal] COPYRIGHT 2017 Public Library of Science ;COPYRIGHT 2017 Public Library of Science ;2017 Public Library of Science. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Wick RR, Judd LM, Gorrie CL, Holt KE (2017) Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads. PLoS Comput Biol 13(6): e1005595. https://doi.org/10.1371/journal.pcbi.1005595 ;2017 Wick et al 2017 Wick et al ;2017 Public Library of Science. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Wick RR, Judd LM, Gorrie CL, Holt KE (2017) Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads. PLoS Comput Biol 13(6): e1005595. https://doi.org/10.1371/journal.pcbi.1005595 ;ISSN: 1553-7358 ;ISSN: 1553-734X ;EISSN: 1553-7358 ;DOI: 10.1371/journal.pcbi.1005595 ;PMID: 28594827 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
3	Material Type: Article	MRIQC: Advancing the automatic prediction of image quality in MRI from unseen sites PloS one, 2017-09, Vol.12 (9), p.e0184661-e0184661 [Peer Reviewed Journal] COPYRIGHT 2017 Public Library of Science ;COPYRIGHT 2017 Public Library of Science ;2017 Esteban et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2017 Esteban et al 2017 Esteban et al ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0184661 ;PMID: 28945803 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
4	Material Type: Article	DeLTA: Automated cell segmentation, tracking, and lineage reconstruction using deep learning PLoS computational biology, 2020-04, Vol.16 (4), p.e1007673-e1007673 [Peer Reviewed Journal] COPYRIGHT 2020 Public Library of Science ;COPYRIGHT 2020 Public Library of Science ;2020 Lugagne et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2020 Lugagne et al 2020 Lugagne et al ;ISSN: 1553-7358 ;ISSN: 1553-734X ;EISSN: 1553-7358 ;DOI: 10.1371/journal.pcbi.1007673 ;PMID: 32282792 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
5	Material Type: Article	Deep Learning Automates the Quantitative Analysis of Individual Cells in Live-Cell Imaging Experiments PLoS computational biology, 2016-11, Vol.12 (11), p.e1005177-e1005177 [Peer Reviewed Journal] COPYRIGHT 2016 Public Library of Science ;COPYRIGHT 2016 Public Library of Science ;2016 Public Library of Science. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Van Valen DA, Kudo T, Lane KM, Macklin DN, Quach NT, DeFelice MM, et al. (2016) Deep Learning Automates the Quantitative Analysis of Individual Cells in Live-Cell Imaging Experiments. PLoS Comput Biol 12(11): e1005177. doi:10.1371/journal.pcbi.1005177 ;2016 Van Valen et al 2016 Van Valen et al ;2016 Public Library of Science. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Van Valen DA, Kudo T, Lane KM, Macklin DN, Quach NT, DeFelice MM, et al. (2016) Deep Learning Automates the Quantitative Analysis of Individual Cells in Live-Cell Imaging Experiments. PLoS Comput Biol 12(11): e1005177. doi:10.1371/journal.pcbi.1005177 ;ISSN: 1553-7358 ;ISSN: 1553-734X ;EISSN: 1553-7358 ;DOI: 10.1371/journal.pcbi.1005177 ;PMID: 27814364 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
6	Material Type: Article	Fast online deconvolution of calcium imaging data PLoS computational biology, 2017-03, Vol.13 (3), p.e1005423-e1005423 [Peer Reviewed Journal] COPYRIGHT 2017 Public Library of Science ;COPYRIGHT 2017 Public Library of Science ;2017 Public Library of Science. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Friedrich J, Zhou P, Paninski L (2017) Fast online deconvolution of calcium imaging data. PLoS Comput Biol 13(3): e1005423. https://doi.org/10.1371/journal.pcbi.1005423 ;2017 Friedrich et al 2017 Friedrich et al ;2017 Public Library of Science. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Friedrich J, Zhou P, Paninski L (2017) Fast online deconvolution of calcium imaging data. PLoS Comput Biol 13(3): e1005423. https://doi.org/10.1371/journal.pcbi.1005423 ;ISSN: 1553-7358 ;ISSN: 1553-734X ;EISSN: 1553-7358 ;DOI: 10.1371/journal.pcbi.1005423 ;PMID: 28291787 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
7	Material Type: Article	Building gene regulatory networks from scATAC-seq and scRNA-seq using Linked Self Organizing Maps PLoS computational biology, 2019-11, Vol.15 (11), p.e1006555-e1006555 [Peer Reviewed Journal] COPYRIGHT 2019 Public Library of Science ;2019 Jansen et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2019 Jansen et al 2019 Jansen et al ;ISSN: 1553-7358 ;ISSN: 1553-734X ;EISSN: 1553-7358 ;DOI: 10.1371/journal.pcbi.1006555 ;PMID: 31682608 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
8	Material Type: Article	Apollo: Democratizing genome annotation PLoS computational biology, 2019-02, Vol.15 (2), p.e1006790-e1006790 [Peer Reviewed Journal] COPYRIGHT 2019 Public Library of Science ;COPYRIGHT 2019 Public Library of Science ;2019 Dunn et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2019 Dunn et al 2019 Dunn et al ;ISSN: 1553-7358 ;ISSN: 1553-734X ;EISSN: 1553-7358 ;DOI: 10.1371/journal.pcbi.1006790 ;PMID: 30726205 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
9	Material Type: Article	Integrating Hi-C links with assembly graphs for chromosome-scale assembly PLoS computational biology, 2019-08, Vol.15 (8), p.e1007273-e1007273 [Peer Reviewed Journal] COPYRIGHT 2019 Public Library of Science ;COPYRIGHT 2019 Public Library of Science ;This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication: https://creativecommons.org/publicdomain/zero/1.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;ISSN: 1553-7358 ;ISSN: 1553-734X ;EISSN: 1553-7358 ;DOI: 10.1371/journal.pcbi.1007273 ;PMID: 31433799 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
10	Material Type: Article	Accurate De Novo Prediction of Protein Contact Map by Ultra-Deep Learning Model PLoS computational biology, 2017-01, Vol.13 (1), p.e1005324-e1005324 [Peer Reviewed Journal] COPYRIGHT 2017 Public Library of Science ;COPYRIGHT 2017 Public Library of Science ;2017 Public Library of Science. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Wang S, Sun S, Li Z, Zhang R, Xu J (2017) Accurate De Novo Prediction of Protein Contact Map by Ultra-Deep Learning Model. PLoS Comput Biol 13(1): e1005324. doi:10.1371/journal.pcbi.1005324 ;2017 Wang et al 2017 Wang et al ;2017 Public Library of Science. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Wang S, Sun S, Li Z, Zhang R, Xu J (2017) Accurate De Novo Prediction of Protein Contact Map by Ultra-Deep Learning Model. PLoS Comput Biol 13(1): e1005324. doi:10.1371/journal.pcbi.1005324 ;ISSN: 1553-7358 ;ISSN: 1553-734X ;EISSN: 1553-7358 ;DOI: 10.1371/journal.pcbi.1005324 ;PMID: 28056090 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
11	Material Type: Article	Transcriptomics technologies PLoS computational biology, 2017-05, Vol.13 (5), p.e1005457-e1005457 [Peer Reviewed Journal] COPYRIGHT 2017 Public Library of Science ;COPYRIGHT 2017 Public Library of Science ;2017 Public Library of Science. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Lowe R, Shirley N, Bleackley M, Dolan S, Shafee T (2017) Transcriptomics technologies. PLoS Comput Biol 13(5): e1005457. https://doi.org/10.1371/journal.pcbi.1005457 ;2017 Lowe et al 2017 Lowe et al ;2017 Public Library of Science. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Lowe R, Shirley N, Bleackley M, Dolan S, Shafee T (2017) Transcriptomics technologies. PLoS Comput Biol 13(5): e1005457. https://doi.org/10.1371/journal.pcbi.1005457 ;ISSN: 1553-7358 ;ISSN: 1553-734X ;EISSN: 1553-7358 ;DOI: 10.1371/journal.pcbi.1005457 ;PMID: 28545146 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
12	Material Type: Article	SARTools: A DESeq2- and EdgeR-Based R Pipeline for Comprehensive Differential Analysis of RNA-Seq Data PloS one, 2016-06, Vol.11 (6), p.e0157022-e0157022 [Peer Reviewed Journal] COPYRIGHT 2016 Public Library of Science ;COPYRIGHT 2016 Public Library of Science ;2016 Varet et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;Attribution ;2016 Varet et al 2016 Varet et al ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0157022 ;PMID: 27280887 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
13	Material Type: Article	Polypolish: Short-read polishing of long-read bacterial genome assemblies PLoS computational biology, 2022-01, Vol.18 (1), p.e1009802-e1009802 [Peer Reviewed Journal] COPYRIGHT 2022 Public Library of Science ;2022 Wick, Holt. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2022 Wick, Holt 2022 Wick, Holt ;ISSN: 1553-7358 ;ISSN: 1553-734X ;EISSN: 1553-7358 ;DOI: 10.1371/journal.pcbi.1009802 ;PMID: 35073327 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
14	Material Type: Article	Microbial resolution of whole genome shotgun and 16S amplicon metagenomic sequencing using publicly available NEON data PloS one, 2020-02, Vol.15 (2), p.e0228899 [Peer Reviewed Journal] 2020 Brumfield et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2020 Brumfield et al 2020 Brumfield et al ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0228899 ;PMID: 32053657 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
15	Material Type: Article	Iterative sure independence screening EM-Bayesian LASSO algorithm for multi-locus genome-wide association studies PLoS computational biology, 2017-01, Vol.13 (1), p.e1005357-e1005357 [Peer Reviewed Journal] COPYRIGHT 2017 Public Library of Science ;COPYRIGHT 2017 Public Library of Science ;2017 Public Library of Science. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Tamba CL, Ni Y-L, Zhang Y-M (2017) Iterative sure independence screening EM-Bayesian LASSO algorithm for multi-locus genome-wide association studies. PLoS Comput Biol 13(1): e1005357. doi:10.1371/journal.pcbi.1005357 ;2017 Tamba et al 2017 Tamba et al ;2017 Public Library of Science. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Tamba CL, Ni Y-L, Zhang Y-M (2017) Iterative sure independence screening EM-Bayesian LASSO algorithm for multi-locus genome-wide association studies. PLoS Comput Biol 13(1): e1005357. doi:10.1371/journal.pcbi.1005357 ;ISSN: 1553-7358 ;ISSN: 1553-734X ;EISSN: 1553-7358 ;DOI: 10.1371/journal.pcbi.1005357 ;PMID: 28141824 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
16	Material Type: Article	A novel network control model for identifying personalized driver genes in cancer PLoS computational biology, 2019-11, Vol.15 (11), p.e1007520-e1007520 [Peer Reviewed Journal] COPYRIGHT 2019 Public Library of Science ;2019 Guo et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2019 Guo et al 2019 Guo et al ;ISSN: 1553-7358 ;ISSN: 1553-734X ;EISSN: 1553-7358 ;DOI: 10.1371/journal.pcbi.1007520 ;PMID: 31765387 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
17	Material Type: Article	Leveraging functional annotations in genetic risk prediction for human complex diseases PLoS computational biology, 2017-06, Vol.13 (6), p.e1005589-e1005589 [Peer Reviewed Journal] COPYRIGHT 2017 Public Library of Science ;COPYRIGHT 2017 Public Library of Science ;2017 Public Library of Science. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Hu Y, Lu Q, Powles R, Yao X, Yang C, Fang F, et al. (2017) Leveraging functional annotations in genetic risk prediction for human complex diseases. PLoS Comput Biol 13(6): e1005589. https://doi.org/10.1371/journal.pcbi.1005589 ;2017 Hu et al 2017 Hu et al ;2017 Public Library of Science. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Hu Y, Lu Q, Powles R, Yao X, Yang C, Fang F, et al. (2017) Leveraging functional annotations in genetic risk prediction for human complex diseases. PLoS Comput Biol 13(6): e1005589. https://doi.org/10.1371/journal.pcbi.1005589 ;ISSN: 1553-7358 ;ISSN: 1553-734X ;EISSN: 1553-7358 ;DOI: 10.1371/journal.pcbi.1005589 ;PMID: 28594818 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
18	Material Type: Article	Cell segmentation and tracking using CNN-based distance predictions and a graph-based matching strategy PloS one, 2020-12, Vol.15 (12), p.e0243219-e0243219 [Peer Reviewed Journal] COPYRIGHT 2020 Public Library of Science ;COPYRIGHT 2020 Public Library of Science ;2020 Scherr et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2020 Scherr et al 2020 Scherr et al ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0243219 ;PMID: 33290432 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
19	Material Type: Article	A comprehensive atlas of white matter tracts in the chimpanzee PLoS biology, 2020-12, Vol.18 (12), p.e3000971-e3000971 [Peer Reviewed Journal] 2020 Bryant et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2020 Bryant et al 2020 Bryant et al ;ISSN: 1545-7885 ;ISSN: 1544-9173 ;EISSN: 1545-7885 ;DOI: 10.1371/journal.pbio.3000971 ;PMID: 33383575 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
20	Material Type: Article	Development of a multiplex Loop-Mediated Isothermal Amplification (LAMP) assay for on-site diagnosis of SARS CoV-2 PloS one, 2021-03, Vol.16 (3), p.e0248042-e0248042 [Peer Reviewed Journal] COPYRIGHT 2021 Public Library of Science ;COPYRIGHT 2021 Public Library of Science ;2021 Jang et al 2021 Jang et al ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0248042 ;PMID: 33657176 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by