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1
Deep learning allows genome-scale prediction of Michaelis constants from structural features
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Deep learning allows genome-scale prediction of Michaelis constants from structural features

PLoS biology, 2021-10, Vol.19 (10), p.e3001402-e3001402 [Peer Reviewed Journal]

2021 Kroll et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2021 Kroll et al 2021 Kroll et al ;ISSN: 1545-7885 ;ISSN: 1544-9173 ;EISSN: 1545-7885 ;DOI: 10.1371/journal.pbio.3001402 ;PMID: 34665809

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2
Structural insight into molecular mechanism of poly(ethylene terephthalate) degradation
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Structural insight into molecular mechanism of poly(ethylene terephthalate) degradation

Nature communications, 2018-01, Vol.9 (1), p.382-12, Article 382 [Peer Reviewed Journal]

2018. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2018 ;ISSN: 2041-1723 ;EISSN: 2041-1723 ;DOI: 10.1038/s41467-018-02881-1 ;PMID: 29374183

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3
Phage-assisted continuous evolution of proteases with altered substrate specificity
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Phage-assisted continuous evolution of proteases with altered substrate specificity

Nature communications, 2017-10, Vol.8 (1), p.956-11, Article 956 [Peer Reviewed Journal]

2017. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2017 ;ISSN: 2041-1723 ;EISSN: 2041-1723 ;DOI: 10.1038/s41467-017-01055-9 ;PMID: 29038472

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4
Dynamic allostery-based molecular workings of kinase: peptide complexes
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Dynamic allostery-based molecular workings of kinase: peptide complexes

Proceedings of the National Academy of Sciences - PNAS, 2019-07, Vol.116 (30), p.15052-15061 [Peer Reviewed Journal]

Copyright National Academy of Sciences Jul 23, 2019 ;2019 ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.1900163116 ;PMID: 31285328

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5
A selective jumonji H3K27 demethylase inhibitor modulates the proinflammatory macrophage response
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A selective jumonji H3K27 demethylase inhibitor modulates the proinflammatory macrophage response

Nature (London), 2012-08, Vol.488 (7411), p.404-408 [Peer Reviewed Journal]

2014 INIST-CNRS ;COPYRIGHT 2012 Nature Publishing Group ;COPYRIGHT 2012 Nature Publishing Group ;Copyright Nature Publishing Group Aug 16, 2012 ;ISSN: 0028-0836 ;EISSN: 1476-4687 ;DOI: 10.1038/nature11262 ;PMID: 22842901 ;CODEN: NATUAS

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6
A Single Cysteine Residue in the Translocation Pathway of the Mitosomal ADP/ATP Carrier from Cryptosporidium parvum Confers a Broad Nucleotide Specificity
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A Single Cysteine Residue in the Translocation Pathway of the Mitosomal ADP/ATP Carrier from Cryptosporidium parvum Confers a Broad Nucleotide Specificity

International journal of molecular sciences, 2020-11, Vol.21 (23), p.8971 [Peer Reviewed Journal]

2020. This work is licensed under http://creativecommons.org/licenses/by/3.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2020 by the authors. 2020 ;ISSN: 1422-0067 ;ISSN: 1661-6596 ;EISSN: 1422-0067 ;DOI: 10.3390/ijms21238971 ;PMID: 33255957

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7
A PP2A-B55 recognition signal controls substrate dephosphorylation kinetics during mitotic exit
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A PP2A-B55 recognition signal controls substrate dephosphorylation kinetics during mitotic exit

The Journal of cell biology, 2016-08, Vol.214 (5), p.539-554 [Peer Reviewed Journal]

2016 Cundell et al. ;Copyright Rockefeller University Press Aug 29, 2016 ;2016 Cundell et al. 2016 ;ISSN: 0021-9525 ;EISSN: 1540-8140 ;DOI: 10.1083/jcb.201606033 ;PMID: 27551054 ;CODEN: JCLBA3

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8
Biochemical and pharmacological characterization of the human lymphocyte antigen B-associated transcript 5 (BAT5/ABHD16A)
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Biochemical and pharmacological characterization of the human lymphocyte antigen B-associated transcript 5 (BAT5/ABHD16A)

PloS one, 2014-10, Vol.9 (10), p.e109869-e109869 [Peer Reviewed Journal]

COPYRIGHT 2014 Public Library of Science ;COPYRIGHT 2014 Public Library of Science ;2014 Savinainen et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2014 Savinainen et al 2014 Savinainen et al ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0109869 ;PMID: 25290914

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9
Arg-type dihydroflavonol 4-reductase genes from the fern Dryopteris erythrosora play important roles in the biosynthesis of anthocyanins
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Arg-type dihydroflavonol 4-reductase genes from the fern Dryopteris erythrosora play important roles in the biosynthesis of anthocyanins

PloS one, 2020-05, Vol.15 (5), p.e0232090 [Peer Reviewed Journal]

COPYRIGHT 2020 Public Library of Science ;COPYRIGHT 2020 Public Library of Science ;2020 Chen et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2020 Chen et al 2020 Chen et al ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0232090 ;PMID: 32357153

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10
The intramembrane protease SPPL2c promotes male germ cell development by cleaving phospholamban
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The intramembrane protease SPPL2c promotes male germ cell development by cleaving phospholamban

EMBO reports, 2019-03, Vol.20 (3), p.n/a [Peer Reviewed Journal]

2019 The Authors ;2019 The Authors. ;2019 EMBO ;ISSN: 1469-221X ;EISSN: 1469-3178 ;DOI: 10.15252/embr.201846449 ;PMID: 30733280

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11
Characterization of a Recombinant Trehalose Synthase from Arthrobacter chlorophenolicus and its Unique Kinetics Indicating a Substrate Cooperativity
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Characterization of a Recombinant Trehalose Synthase from Arthrobacter chlorophenolicus and its Unique Kinetics Indicating a Substrate Cooperativity

Applied biochemistry and biotechnology, 2019-04, Vol.187 (4), p.1255-1271 [Peer Reviewed Journal]

Springer Science+Business Media, LLC, part of Springer Nature 2018 ;Applied Biochemistry and Biotechnology is a copyright of Springer, (2018). All Rights Reserved. ;ISSN: 0273-2289 ;EISSN: 1559-0291 ;DOI: 10.1007/s12010-018-2877-1 ;PMID: 30218299

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12
The molecular basis for sugar import in malaria parasites
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The molecular basis for sugar import in malaria parasites

Nature (London), 2020-02, Vol.578 (7794), p.321-325 [Peer Reviewed Journal]

COPYRIGHT 2020 Nature Publishing Group ;COPYRIGHT 2020 Nature Publishing Group ;Copyright Nature Publishing Group Feb 13, 2020 ;ISSN: 0028-0836 ;ISSN: 1476-4687 ;EISSN: 1476-4687 ;DOI: 10.1038/s41586-020-1963-z ;PMID: 31996846

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13
Identification of Novel Substrates for cGMP Dependent Protein Kinase (PKG) through Kinase Activity Profiling to Understand Its Putative Role in Inherited Retinal Degeneration
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Identification of Novel Substrates for cGMP Dependent Protein Kinase (PKG) through Kinase Activity Profiling to Understand Its Putative Role in Inherited Retinal Degeneration

International journal of molecular sciences, 2021-01, Vol.22 (3), p.1180 [Peer Reviewed Journal]

2021. This work is licensed under http://creativecommons.org/licenses/by/3.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2021 by the authors. 2021 ;ISSN: 1422-0067 ;ISSN: 1661-6596 ;EISSN: 1422-0067 ;DOI: 10.3390/ijms22031180 ;PMID: 33503999

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14
An intramembrane chaperone complex facilitates membrane protein biogenesis
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An intramembrane chaperone complex facilitates membrane protein biogenesis

Nature (London), 2020-08, Vol.584 (7822), p.630-634 [Peer Reviewed Journal]

COPYRIGHT 2020 Nature Publishing Group ;Copyright Nature Publishing Group Aug 27, 2020 ;ISSN: 0028-0836 ;EISSN: 1476-4687 ;DOI: 10.1038/s41586-020-2624-y ;PMID: 32814900

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15
PROSPER: an integrated feature-based tool for predicting protease substrate cleavage sites
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PROSPER: an integrated feature-based tool for predicting protease substrate cleavage sites

PloS one, 2012-11, Vol.7 (11), p.e50300 [Peer Reviewed Journal]

COPYRIGHT 2012 Public Library of Science ;COPYRIGHT 2012 Public Library of Science ;2012 Song et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: https://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2012 Song et al 2012 Song et al ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0050300 ;PMID: 23209700

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16
Identification of a novel cyclomaltodextrinase annotated as a neopullulanase in the genome of Bacillus cereus
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Identification of a novel cyclomaltodextrinase annotated as a neopullulanase in the genome of Bacillus cereus

Archives of microbiology, 2023-03, Vol.205 (3), p.86-86, Article 86 [Peer Reviewed Journal]

The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature 2023. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. ;2023. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature. ;ISSN: 0302-8933 ;EISSN: 1432-072X ;DOI: 10.1007/s00203-022-03390-y ;PMID: 36757622

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17
The hydrophobicity of an amino acid residue in a flexible loop of KP-43 protease alters activity toward a macromolecule substrate
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The hydrophobicity of an amino acid residue in a flexible loop of KP-43 protease alters activity toward a macromolecule substrate

Applied microbiology and biotechnology, 2020-10, Vol.104 (19), p.8339-8349 [Peer Reviewed Journal]

The Author(s) 2020 ;COPYRIGHT 2020 Springer ;The Author(s) 2020. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;ISSN: 0175-7598 ;EISSN: 1432-0614 ;DOI: 10.1007/s00253-020-10826-2 ;PMID: 32840642

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18
Profiling PRMT methylome reveals roles of hnRNPA1 arginine methylation in RNA splicing and cell growth
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Profiling PRMT methylome reveals roles of hnRNPA1 arginine methylation in RNA splicing and cell growth

Nature communications, 2021-03, Vol.12 (1), p.1946-1946, Article 1946 [Peer Reviewed Journal]

The Author(s) 2021. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2021 ;ISSN: 2041-1723 ;EISSN: 2041-1723 ;DOI: 10.1038/s41467-021-21963-1 ;PMID: 33782401

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19
Characterization and identification of lysine glutarylation based on intrinsic interdependence between positions in the substrate sites
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Article
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Characterization and identification of lysine glutarylation based on intrinsic interdependence between positions in the substrate sites

BMC bioinformatics, 2019-02, Vol.19 (Suppl 13), p.384-384, Article 384 [Peer Reviewed Journal]

COPYRIGHT 2019 BioMed Central Ltd. ;Copyright © 2019. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s). 2019 ;ISSN: 1471-2105 ;EISSN: 1471-2105 ;DOI: 10.1186/s12859-018-2394-9 ;PMID: 30717647

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20
GDSL lipases modulate immunity through lipid homeostasis in rice
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GDSL lipases modulate immunity through lipid homeostasis in rice

PLoS pathogens, 2017-11, Vol.13 (11), p.e1006724-e1006724 [Peer Reviewed Journal]

2017 Public Library of Science. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Gao M, Yin X, Yang W, Lam SM, Tong X, Liu J, et al. (2017) GDSL lipases modulate immunity through lipid homeostasis in rice. PLoS Pathog 13(11): e1006724. https://doi.org/10.1371/journal.ppat.1006724 ;2017 Gao et al 2017 Gao et al ;2017 Public Library of Science. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Gao M, Yin X, Yang W, Lam SM, Tong X, Liu J, et al. (2017) GDSL lipases modulate immunity through lipid homeostasis in rice. PLoS Pathog 13(11): e1006724. https://doi.org/10.1371/journal.ppat.1006724 ;ISSN: 1553-7374 ;ISSN: 1553-7366 ;EISSN: 1553-7374 ;DOI: 10.1371/journal.ppat.1006724 ;PMID: 29131851

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