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1
How to fail at species delimitation
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How to fail at species delimitation

Molecular ecology, 2013-09, Vol.22 (17), p.4369-4383 [Peer Reviewed Journal]

2013 John Wiley & Sons Ltd ;2014 INIST-CNRS ;2013 John Wiley & Sons Ltd. ;ISSN: 0962-1083 ;EISSN: 1365-294X ;DOI: 10.1111/mec.12413 ;PMID: 23855767

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2
The ModelSEED Biochemistry Database for the integration of metabolic annotations and the reconstruction, comparison and analysis of metabolic models for plants, fungi and microbes
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The ModelSEED Biochemistry Database for the integration of metabolic annotations and the reconstruction, comparison and analysis of metabolic models for plants, fungi and microbes

Nucleic acids research, 2021-01, Vol.49 (D1), p.D575-D588 [Peer Reviewed Journal]

The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research. 2021 ;The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research. ;ISSN: 0305-1048 ;EISSN: 1362-4962 ;DOI: 10.1093/nar/gkaa746 ;PMID: 32986834

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3
Chelex 100 as a Medium for Simple Extraction of DNA for PCR-Based Typing from Forensic Material
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Chelex 100 as a Medium for Simple Extraction of DNA for PCR-Based Typing from Forensic Material

BioTechniques, 2013-03, Vol.54 (3), p.134-139 [Peer Reviewed Journal]

1992 INIST-CNRS ;ISSN: 0736-6205 ;EISSN: 1940-9818 ;DOI: 10.2144/000114018 ;PMID: 1867860 ;CODEN: BTNQDO

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4
Why has it taken so long for biological psychiatry to develop clinical tests and what to do about it?
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Why has it taken so long for biological psychiatry to develop clinical tests and what to do about it?

Molecular psychiatry, 2012-12, Vol.17 (12), p.1174-1179 [Peer Reviewed Journal]

2015 INIST-CNRS ;COPYRIGHT 2012 Nature Publishing Group ;Copyright Nature Publishing Group Dec 2012 ;Macmillan Publishers Limited 2012. ;ISSN: 1359-4184 ;EISSN: 1476-5578 ;DOI: 10.1038/mp.2012.105 ;PMID: 22869033

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5
IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth
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IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth

Bioinformatics (Oxford, England), 2012-06, Vol.28 (11), p.1420-1428 [Peer Reviewed Journal]

2015 INIST-CNRS ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bts174 ;PMID: 22495754

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6
Towards a unified paradigm for sequence-based identification of fungi
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Towards a unified paradigm for sequence-based identification of fungi

Molecular ecology, 2013-11, Vol.22 (21), p.5271-5277 [Peer Reviewed Journal]

2013 John Wiley & Sons Ltd ;2015 INIST-CNRS ;2013 John Wiley & Sons Ltd. ;ISSN: 0962-1083 ;ISSN: 1365-294X ;EISSN: 1365-294X ;DOI: 10.1111/mec.12481 ;PMID: 24112409

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7
Microbiota is essential for social development in the mouse
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Microbiota is essential for social development in the mouse

Molecular psychiatry, 2014-02, Vol.19 (2), p.146-148 [Peer Reviewed Journal]

2015 INIST-CNRS ;COPYRIGHT 2014 Nature Publishing Group ;Copyright Nature Publishing Group Feb 2014 ;Copyright © 2014 Macmillan Publishers Limited 2014 Macmillan Publishers Limited ;ISSN: 1359-4184 ;EISSN: 1476-5578 ;DOI: 10.1038/mp.2013.65 ;PMID: 23689536

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8
CD-HIT: accelerated for clustering the next-generation sequencing data
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CD-HIT: accelerated for clustering the next-generation sequencing data

Bioinformatics, 2012-12, Vol.28 (23), p.3150-3152 [Peer Reviewed Journal]

2014 INIST-CNRS ;The Author 2012. Published by Oxford University Press. 2012 ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;EISSN: 1460-2059 ;DOI: 10.1093/bioinformatics/bts565 ;PMID: 23060610

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9
GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research—an update
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GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research—an update

Bioinformatics (Oxford, England), 2012-10, Vol.28 (19), p.2537-2539 [Peer Reviewed Journal]

2015 INIST-CNRS ;The Author(s) 2012. Published by Oxford University Press. 2012 ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bts460 ;PMID: 22820204

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10
Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
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Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

Bioinformatics (Oxford, England), 2012-06, Vol.28 (12), p.1647-1649 [Peer Reviewed Journal]

2015 INIST-CNRS ;The Author(s) 2012. Published by Oxford University Press. 2012 ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bts199 ;PMID: 22543367

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11
Comet: An open-source MS/MS sequence database search tool
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Comet: An open-source MS/MS sequence database search tool

Proteomics (Weinheim), 2013-01, Vol.13 (1), p.22-24 [Peer Reviewed Journal]

2012 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim ;2014 INIST-CNRS ;2012 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim. ;2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim ;ISSN: 1615-9853 ;EISSN: 1615-9861 ;DOI: 10.1002/pmic.201200439 ;PMID: 23148064

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12
SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data
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SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data

Bioinformatics, 2012-12, Vol.28 (24), p.3211-3217 [Peer Reviewed Journal]

2014 INIST-CNRS ;Distributed under a Creative Commons Attribution 4.0 International License ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;EISSN: 1460-2059 ;DOI: 10.1093/bioinformatics/bts611 ;PMID: 23071270

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13
SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes
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SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes

Bioinformatics, 2012-07, Vol.28 (14), p.1823-1829 [Peer Reviewed Journal]

2015 INIST-CNRS ;The Author(s) 2012. Published by Oxford University Press. 2012 ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;EISSN: 1460-2059 ;DOI: 10.1093/bioinformatics/bts252 ;PMID: 22556368

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14
A high-performance computing toolset for relatedness and principal component analysis of SNP data
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A high-performance computing toolset for relatedness and principal component analysis of SNP data

Bioinformatics, 2012-12, Vol.28 (24), p.3326-3328 [Peer Reviewed Journal]

2014 INIST-CNRS ;The Author 2012. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com 2012 ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;EISSN: 1460-2059 ;DOI: 10.1093/bioinformatics/bts606 ;PMID: 23060615

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15
FLASH: fast length adjustment of short reads to improve genome assemblies
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FLASH: fast length adjustment of short reads to improve genome assemblies

Bioinformatics, 2011-11, Vol.27 (21), p.2957-2963 [Peer Reviewed Journal]

The Author 2011. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com 2011 ;2015 INIST-CNRS ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btr507 ;PMID: 21903629

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16
The sva package for removing batch effects and other unwanted variation in high-throughput experiments
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The sva package for removing batch effects and other unwanted variation in high-throughput experiments

Bioinformatics (Oxford, England), 2012-03, Vol.28 (6), p.882-883 [Peer Reviewed Journal]

2015 INIST-CNRS ;The Author 2012. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com 2012 ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bts034 ;PMID: 22257669

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17
The autism brain imaging data exchange: towards a large-scale evaluation of the intrinsic brain architecture in autism
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The autism brain imaging data exchange: towards a large-scale evaluation of the intrinsic brain architecture in autism

Molecular psychiatry, 2014-06, Vol.19 (6), p.659-667 [Peer Reviewed Journal]

2015 INIST-CNRS ;COPYRIGHT 2014 Nature Publishing Group ;Copyright Nature Publishing Group Jun 2014 ;Macmillan Publishers Limited 2014. ;ISSN: 1359-4184 ;EISSN: 1476-5578 ;DOI: 10.1038/mp.2013.78 ;PMID: 23774715

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18
UCHIME improves sensitivity and speed of chimera detection
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UCHIME improves sensitivity and speed of chimera detection

Bioinformatics, 2011-08, Vol.27 (16), p.2194-2200 [Peer Reviewed Journal]

The Author(s) 2011. Published by Oxford University Press. 2011 ;2015 INIST-CNRS ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btr381 ;PMID: 21700674

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19
GAPIT: genome association and prediction integrated tool
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GAPIT: genome association and prediction integrated tool

Bioinformatics, 2012-09, Vol.28 (18), p.2397-2399 [Peer Reviewed Journal]

2015 INIST-CNRS ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;EISSN: 1460-2059 ;DOI: 10.1093/bioinformatics/bts444 ;PMID: 22796960

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20
The variant call format and VCFtools
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The variant call format and VCFtools

Bioinformatics, 2011-08, Vol.27 (15), p.2156-2158 [Peer Reviewed Journal]

The Author(s) 2011. Published by Oxford University Press. 2011 ;2015 INIST-CNRS ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btr330 ;PMID: 21653522

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