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1 |
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A Next Generation Connectivity Map: L1000 Platform and the First 1,000,000 ProfilesCell, 2017-11, Vol.171 (6), p.1437-1452.e17 [Peer Reviewed Journal]2017 Elsevier Inc. ;Copyright © 2017 Elsevier Inc. All rights reserved. ;ISSN: 0092-8674 ;EISSN: 1097-4172 ;DOI: 10.1016/j.cell.2017.10.049 ;PMID: 29195078Full text available |
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Development and applications of single-cell transcriptome analysisNature methods, 2011-04, Vol.8 (4 Suppl), p.S6-S11 [Peer Reviewed Journal]COPYRIGHT 2011 Nature Publishing Group ;Copyright Nature Publishing Group Apr 2011 ;ISSN: 1548-7091 ;EISSN: 1548-7105 ;DOI: 10.1038/nmeth.1557 ;PMID: 21451510Full text available |
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SingleCellSignalR: inference of intercellular networks from single-cell transcriptomicsNucleic acids research, 2020-06, Vol.48 (10), p.e55-e55 [Peer Reviewed Journal]The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research. ;Attribution - NoDerivatives ;The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research. 2020 ;ISSN: 0305-1048 ;EISSN: 1362-4962 ;DOI: 10.1093/nar/gkaa183 ;PMID: 32196115Full text available |
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Salmon provides fast and bias-aware quantification of transcript expressionNature methods, 2017-04, Vol.14 (4), p.417-419 [Peer Reviewed Journal]Copyright Nature Publishing Group Apr 2017 ;ISSN: 1548-7091 ;EISSN: 1548-7105 ;DOI: 10.1038/nmeth.4197 ;PMID: 28263959Full text available |
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Evaluating Robustness and Sensitivity of the NanoString Technologies nCounter Platform to Enable Multiplexed Gene Expression Analysis of Clinical SamplesCancer research (Chicago, Ill.), 2015-07, Vol.75 (13), p.2587-2593 [Peer Reviewed Journal]2015 American Association for Cancer Research. ;ISSN: 0008-5472 ;EISSN: 1538-7445 ;DOI: 10.1158/0008-5472.can-15-0262 ;PMID: 26069246Full text available |
6 |
Material Type: Article
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Pooling across cells to normalize single-cell RNA sequencing data with many zero countsGenome Biology, 2016-04, Vol.17 (1), p.75-75, Article 75 [Peer Reviewed Journal]2016. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;Lun et al. 2016 ;ISSN: 1474-760X ;ISSN: 1474-7596 ;EISSN: 1474-760X ;DOI: 10.1186/s13059-016-0947-7 ;PMID: 27122128Full text available |
7 |
Material Type: Article
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Droplet Digital PCR versus qPCR for gene expression analysis with low abundant targets: from variable nonsense to publication quality dataScientific reports, 2017-05, Vol.7 (1), p.2409-8, Article 2409 [Peer Reviewed Journal]Copyright Nature Publishing Group May 2017 ;The Author(s) 2017 ;ISSN: 2045-2322 ;EISSN: 2045-2322 ;DOI: 10.1038/s41598-017-02217-x ;PMID: 28546538Full text available |
8 |
Material Type: Article
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Benchmarking of cell type deconvolution pipelines for transcriptomics dataNature communications, 2020-11, Vol.11 (1), p.5650-5650, Article 5650 [Peer Reviewed Journal]The Author(s) 2020. corrected publication 2020. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2020 ;ISSN: 2041-1723 ;EISSN: 2041-1723 ;DOI: 10.1038/s41467-020-19015-1 ;PMID: 33159064Full text available |
9 |
Material Type: Article
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Cell fixation and preservation for droplet-based single-cell transcriptomicsBMC biology, 2017-05, Vol.15 (1), p.44-44, Article 44 [Peer Reviewed Journal]Copyright BioMed Central 2017 ;Kocks et al. 2017 ;ISSN: 1741-7007 ;EISSN: 1741-7007 ;DOI: 10.1186/s12915-017-0383-5 ;PMID: 28526029Full text available |
10 |
Material Type: Article
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An ultra high-throughput method for single-cell joint analysis of open chromatin and transcriptomeNature structural & molecular biology, 2019-11, Vol.26 (11), p.1063-1070 [Peer Reviewed Journal]COPYRIGHT 2019 Nature Publishing Group ;COPYRIGHT 2019 Nature Publishing Group ;Copyright Nature Publishing Group Nov 2019 ;ISSN: 1545-9993 ;EISSN: 1545-9985 ;DOI: 10.1038/s41594-019-0323-x ;PMID: 31695190Full text available |
11 |
Material Type: Article
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gVolante for standardizing completeness assessment of genome and transcriptome assembliesBioinformatics (Oxford, England), 2017-11, Vol.33 (22), p.3635-3637 [Peer Reviewed Journal]The Author 2017. Published by Oxford University Press. ;The Author 2017. Published by Oxford University Press. 2017 ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btx445 ;PMID: 29036533Full text available |
12 |
Material Type: Article
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GSVA: gene set variation analysis for microarray and RNA-seq dataBMC bioinformatics, 2013-01, Vol.14 (1), p.7-7, Article 7 [Peer Reviewed Journal]COPYRIGHT 2013 BioMed Central Ltd. ;2013 Hänzelmann et al.; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. ;info:eu-repo/semantics/openAccess © Hänzelam et al. Creative Commons Attribution License http://creativecommons.org/licenses/by/2.0/ http://creativecommons.org/licenses/by/2.0/ ;Copyright © 2013 Hänzelmann et al.; licensee BioMed Central Ltd. 2013 Hänzelmann et al.; licensee BioMed Central Ltd. ;ISSN: 1471-2105 ;EISSN: 1471-2105 ;DOI: 10.1186/1471-2105-14-7 ;PMID: 23323831Full text available |
13 |
Material Type: Article
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Targeting microRNAs in cancer: rationale, strategies and challengesNature reviews. Drug discovery, 2010-10, Vol.9 (10), p.775-789 [Peer Reviewed Journal]COPYRIGHT 2010 Nature Publishing Group ;Copyright Nature Publishing Group Oct 2010 ;ISSN: 1474-1776 ;EISSN: 1474-1784 ;DOI: 10.1038/nrd3179 ;PMID: 20885409Full text available |
14 |
Material Type: Article
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Validation of noise models for single-cell transcriptomicsNature methods, 2014-06, Vol.11 (6), p.637-640 [Peer Reviewed Journal]COPYRIGHT 2014 Nature Publishing Group ;Copyright Nature Publishing Group Jun 2014 ;ISSN: 1548-7091 ;EISSN: 1548-7105 ;DOI: 10.1038/nmeth.2930 ;PMID: 24747814Full text available |
15 |
Material Type: Article
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Evolution of tissue-specific expression of ancestral genes across vertebrates and insectsSpringer Nature Publishing AG Mantica F, Iñiguez LP, Marquez Y, Permanyer J, Torres-Mendez A, Cruz J, et al. Evolution of tissue-specific expression of ancestral genes across vertebrates and insects. Nat Ecol Evol. 2024 Apr 15. DOI: 10.1038/s41559-024-02398-5 [http://dx.doi.org/10.1038/s41559-024-02398-5] info:eu-repo/semantics/embargoedAccess ;ISSN: 2397-334X ;EISSN: 2397-334X ;DOI: 10.1038/s41559-024-02398-5Digital Resources/Online E-Resources |
16 |
Material Type: Article
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Identification of EMT signaling cross-talk and gene regulatory networks by single-cell RNA sequencingProceedings of the National Academy of Sciences - PNAS, 2021-05, Vol.118 (19), p.1 [Peer Reviewed Journal]Copyright National Academy of Sciences May 11, 2021 ;Copyright © 2021 the Author(s). Published by PNAS. 2021 ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.2102050118 ;PMID: 33941680Full text available |
17 |
Material Type: Article
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Standardizing workflows in imaging transcriptomics with the abagen toolboxeLife, 2021-11, Vol.10 [Peer Reviewed Journal]2021, Markello et al. ;COPYRIGHT 2021 eLife Science Publications, Ltd. ;2021, Markello et al. This work is published under https://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2021, Markello et al 2021 Markello et al ;ISSN: 2050-084X ;EISSN: 2050-084X ;DOI: 10.7554/eLife.72129 ;PMID: 34783653Full text available |
18 |
Material Type: Article
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The impact of the Oncotype Dx breast cancer assay in clinical practice: a systematic review and meta-analysisBreast cancer research and treatment, 2013-08, Vol.141 (1), p.13-22 [Peer Reviewed Journal]Springer Science+Business Media New York 2013 ;2014 INIST-CNRS ;COPYRIGHT 2013 Springer ;Springer Science+Business Media New York 2013 2013 ;ISSN: 0167-6806 ;EISSN: 1573-7217 ;DOI: 10.1007/s10549-013-2666-z ;PMID: 23974828 ;CODEN: BCTRD6Full text available |
19 |
Material Type: Article
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DNA methylation profiling in the clinic: applications and challengesNature reviews. Genetics, 2012-10, Vol.13 (10), p.679-692 [Peer Reviewed Journal]2015 INIST-CNRS ;COPYRIGHT 2012 Nature Publishing Group ;COPYRIGHT 2012 Nature Publishing Group ;Copyright Nature Publishing Group Oct 2012 ;ISSN: 1471-0056 ;EISSN: 1471-0064 ;DOI: 10.1038/nrg3270 ;PMID: 22945394Full text available |
20 |
Material Type: Article
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Data Normalization Strategies for MicroRNA QuantificationClinical chemistry (Baltimore, Md.), 2015-11, Vol.61 (11), p.1333-1342 [Peer Reviewed Journal]2015 American Association for Clinical Chemistry. ;COPYRIGHT 2015 American Association for Clinical Chemistry, Inc. ;Copyright American Association for Clinical Chemistry Nov 2015 ;ISSN: 0009-9147 ;EISSN: 1530-8561 ;DOI: 10.1373/clinchem.2015.239459 ;PMID: 26408530Full text available |