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Material Type: Article
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Nigella sativa Extract as a Potent Antioxidant for Petrochemical-Induced Oxidative StressJournal of chromatographic science, 2011-04, Vol.49 (4), p.321-326 [Peer Reviewed Journal]2015 INIST-CNRS ;ISSN: 0021-9665 ;EISSN: 1945-239X ;DOI: 10.1093/chrsci/49.4.321 ;CODEN: JCHSBZFull text available |
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2 |
Material Type: Article
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An expanded Notch-Delta model exhibiting long-range patterning and incorporating MicroRNA regulationPLoS computational biology, 2014-06, Vol.10 (6), p.e1003655-e1003655 [Peer Reviewed Journal]COPYRIGHT 2014 Public Library of Science ;COPYRIGHT 2014 Public Library of Science ;2014 Chen et al 2014 Chen et al ;2014 Chen et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Chen JS, Gumbayan AM, Zeller RW, Mahaffy JM (2014) An Expanded Notch-Delta Model Exhibiting Long-Range Patterning and Incorporating MicroRNA Regulation. PLoS Comput Biol 10(6): e1003655. doi:10.1371/journal.pcbi.1003655 ;ISSN: 1553-7358 ;ISSN: 1553-734X ;EISSN: 1553-7358 ;DOI: 10.1371/journal.pcbi.1003655 ;PMID: 24945987Full text available |
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3 |
Material Type: Article
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An agar-microchamber cell-cultivation system: flexible change of microchamber shapes during cultivation by photo-thermal etchingLab on a chip, 2002-05, Vol.2 (2), p.125-132 [Peer Reviewed Journal]ISSN: 1473-0197 ;EISSN: 1473-0189 ;DOI: 10.1039/b202569h ;PMID: 15100846Full text available |
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4 |
Material Type: Article
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GTDB-Tk: a toolkit to classify genomes with the Genome Taxonomy DatabaseBioinformatics, 2019-11, Vol.36 (6), p.1925-1927 [Peer Reviewed Journal]The Author(s) 2019. Published by Oxford University Press. 2019 ;The Author(s) 2019. Published by Oxford University Press. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btz848 ;PMID: 31730192Full text available |
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5 |
Material Type: Article
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GTDB-Tk v2: memory friendly classification with the genome taxonomy databaseBioinformatics (Oxford, England), 2022-11, Vol.38 (23), p.5315-5316 [Peer Reviewed Journal]The Author(s) 2022. Published by Oxford University Press. ;The Author(s) 2022. Published by Oxford University Press. 2022 ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btac672 ;PMID: 36218463Full text available |
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6 |
Material Type: Article
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GraphDTA: predicting drug–target binding affinity with graph neural networksBioinformatics, 2021-05, Vol.37 (8), p.1140-1147 [Peer Reviewed Journal]The Author(s) 2020. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com 2020 ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btaa921Full text available |
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7 |
Material Type: Article
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BioBERT: a pre-trained biomedical language representation model for biomedical text miningBioinformatics, 2020-02, Vol.36 (4), p.1234-1240 [Peer Reviewed Journal]The Author(s) 2019. Published by Oxford University Press. 2019 ;The Author(s) 2019. Published by Oxford University Press. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btz682 ;PMID: 31501885Full text available |
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8 |
Material Type: Article
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RAxML-NG: a fast, scalable and user-friendly tool for maximum likelihood phylogenetic inferenceBioinformatics, 2019-11, Vol.35 (21), p.4453-4455 [Peer Reviewed Journal]The Author(s) 2019. Published by Oxford University Press. 2019 ;The Author(s) 2019. Published by Oxford University Press. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btz305 ;PMID: 31070718Full text available |
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9 |
Material Type: Article
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Scaling tree-based automated machine learning to biomedical big data with a feature set selectorBioinformatics, 2020-01, Vol.36 (1), p.250-256 [Peer Reviewed Journal]The Author(s) 2019. Published by Oxford University Press. 2019 ;The Author(s) 2019. Published by Oxford University Press. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btz470 ;PMID: 31165141Full text available |
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10 |
Material Type: Article
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fastp: an ultra-fast all-in-one FASTQ preprocessorBioinformatics, 2018-09, Vol.34 (17), p.i884-i890 [Peer Reviewed Journal]The Author(s) 2018. Published by Oxford University Press. 2018 ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty560 ;PMID: 30423086Full text available |
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11 |
Material Type: Article
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Minimap2: pairwise alignment for nucleotide sequencesBioinformatics, 2018-09, Vol.34 (18), p.3094-3100 [Peer Reviewed Journal]The Author(s) 2018. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com 2018 ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty191 ;PMID: 29750242Full text available |
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12 |
Material Type: Article
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ape 5.0: an environment for modern phylogenetics and evolutionary analyses in RBioinformatics, 2019-02, Vol.35 (3), p.526-528 [Peer Reviewed Journal]The Author(s) 2018. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com 2018 ;Distributed under a Creative Commons Attribution 4.0 International License ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty633 ;PMID: 30016406Full text available |
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13 |
Material Type: Article
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TISIDB: an integrated repository portal for tumor–immune system interactionsBioinformatics, 2019-10, Vol.35 (20), p.4200-4202 [Peer Reviewed Journal]The Author(s) 2019. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com 2019 ;The Author(s) (2019). Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btz210 ;PMID: 30903160Full text available |
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14 |
Material Type: Article
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Compound-protein interaction prediction with end-to-end learning of neural networks for graphs and sequencesBioinformatics, 2019-01, Vol.35 (2), p.309-318 [Peer Reviewed Journal]The Author(s) 2018. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com 2018 ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty535 ;PMID: 29982330Full text available |
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15 |
Material Type: Article
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ARGs-OAP v2.0 with an expanded SARG database and Hidden Markov Models for enhancement characterization and quantification of antibiotic resistance genes in environmental metagenomesBioinformatics, 2018-07, Vol.34 (13), p.2263-2270 [Peer Reviewed Journal]The Author(s) 2018. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com 2018 ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty053 ;PMID: 29408954Full text available |
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16 |
Material Type: Article
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Nextstrain: real-time tracking of pathogen evolutionBioinformatics, 2018-12, Vol.34 (23), p.4121-4123 [Peer Reviewed Journal]The Author(s) 2018. Published by Oxford University Press. 2018 ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty407 ;PMID: 29790939Full text available |
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17 |
Material Type: Article
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Identifying and removing haplotypic duplication in primary genome assembliesBioinformatics, 2020-05, Vol.36 (9), p.2896-2898 [Peer Reviewed Journal]The Author(s) 2020. Published by Oxford University Press. 2020 ;The Author(s) 2020. Published by Oxford University Press. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btaa025 ;PMID: 31971576Full text available |
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18 |
Material Type: Article
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KofamKOALA: KEGG Ortholog assignment based on profile HMM and adaptive score thresholdBioinformatics, 2020-04, Vol.36 (7), p.2251-2252 [Peer Reviewed Journal]The Author(s) 2019. Published by Oxford University Press. 2019 ;The Author(s) 2019. Published by Oxford University Press. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btz859 ;PMID: 31742321Full text available |
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19 |
Material Type: Article
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The lncLocator: a subcellular localization predictor for long non-coding RNAs based on a stacked ensemble classifierBioinformatics, 2018-07, Vol.34 (13), p.2185-2194 [Peer Reviewed Journal]The Author(s) 2018. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com 2018 ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty085 ;PMID: 29462250Full text available |
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20 |
Material Type: Article
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VarSome: the human genomic variant search engineBioinformatics (Oxford, England), 2019-06, Vol.35 (11), p.1978-1980 [Peer Reviewed Journal]The Author(s) 2018. Published by Oxford University Press. ;The Author(s) 2018. Published by Oxford University Press. 2018 ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty897 ;PMID: 30376034Full text available |