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1
Criteria2Query: a natural language interface to clinical databases for cohort definition
Criteria2Query: a natural language interface to clinical databases for cohort definition
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Criteria2Query: a natural language interface to clinical databases for cohort definition

Journal of the American Medical Informatics Association : JAMIA, 2019-04, Vol.26 (4), p.294-305 [Peer Reviewed Journal]

The Author(s) 2019. Published by Oxford University Press on behalf of the American Medical Informatics Association. 2019 ;The Author(s) 2019. Published by Oxford University Press on behalf of the American Medical Informatics Association. ;ISSN: 1527-974X ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1093/jamia/ocy178 ;PMID: 30753493

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2
Automated methods for the summarization of electronic health records
Automated methods for the summarization of electronic health records
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Automated methods for the summarization of electronic health records

Journal of the American Medical Informatics Association : JAMIA, 2015-09, Vol.22 (5), p.938-947 [Peer Reviewed Journal]

The Author 2015. Published by Oxford University Press on behalf of the American Medical Informatics Association. All rights reserved. 2015 ;The Author 2015. Published by Oxford University Press on behalf of the American Medical Informatics Association. All rights reserved. ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1093/jamia/ocv032 ;PMID: 25882031

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3
Pharmacovigilance from social media: mining adverse drug reaction mentions using sequence labeling with word embedding cluster features
Pharmacovigilance from social media: mining adverse drug reaction mentions using sequence labeling with word embedding cluster features
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Pharmacovigilance from social media: mining adverse drug reaction mentions using sequence labeling with word embedding cluster features

Journal of the American Medical Informatics Association : JAMIA, 2015-05, Vol.22 (3), p.671-681 [Peer Reviewed Journal]

The Author 2015. Published by Oxford University Press on behalf of the American Medical Informatics Association. 2015 ;The Author 2015. Published by Oxford University Press on behalf of the American Medical Informatics Association. ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1093/jamia/ocu041 ;PMID: 25755127

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4
Extracting information from the text of electronic medical records to improve case detection: a systematic review
Extracting information from the text of electronic medical records to improve case detection: a systematic review
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Extracting information from the text of electronic medical records to improve case detection: a systematic review

Journal of the American Medical Informatics Association : JAMIA, 2016-09, Vol.23 (5), p.1007-1015 [Peer Reviewed Journal]

The Author 2016. Published by Oxford University Press on behalf of the American Medical Informatics Association. 2016 ;The Author 2016. Published by Oxford University Press on behalf of the American Medical Informatics Association. ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1093/jamia/ocv180 ;PMID: 26911811

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5
Extracting social determinants of health from electronic health records using natural language processing: a systematic review
Extracting social determinants of health from electronic health records using natural language processing: a systematic review
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Extracting social determinants of health from electronic health records using natural language processing: a systematic review

Journal of the American Medical Informatics Association : JAMIA, 2021-11, Vol.28 (12), p.2716-2727 [Peer Reviewed Journal]

The Author(s) 2021. Published by Oxford University Press on behalf of the American Medical Informatics Association. 2021 ;The Author(s) 2021. Published by Oxford University Press on behalf of the American Medical Informatics Association. ;ISSN: 1527-974X ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1093/jamia/ocab170 ;PMID: 34613399

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6
Biomedical and clinical English model packages for the Stanza Python NLP library
Biomedical and clinical English model packages for the Stanza Python NLP library
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Biomedical and clinical English model packages for the Stanza Python NLP library

Journal of the American Medical Informatics Association : JAMIA, 2021-09, Vol.28 (9), p.1892-1899 [Peer Reviewed Journal]

The Author(s) 2021. Published by Oxford University Press on behalf of the American Medical Informatics Association. 2021 ;ISSN: 1527-974X ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1093/jamia/ocab090 ;PMID: 34157094

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7
A systematic literature review of automatic Alzheimer’s disease detection from speech and language
A systematic literature review of automatic Alzheimer’s disease detection from speech and language
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A systematic literature review of automatic Alzheimer’s disease detection from speech and language

Journal of the American Medical Informatics Association : JAMIA, 2020-11, Vol.27 (11), p.1784-1797 [Peer Reviewed Journal]

The Author(s) 2020. Published by Oxford University Press on behalf of the American Medical Informatics Association. 2020 ;The Author(s) 2020. Published by Oxford University Press on behalf of the American Medical Informatics Association. ;ISSN: 1527-974X ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1093/jamia/ocaa174 ;PMID: 32929494

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8
A multilingual gold-standard corpus for biomedical concept recognition: the Mantra GSC
A multilingual gold-standard corpus for biomedical concept recognition: the Mantra GSC
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A multilingual gold-standard corpus for biomedical concept recognition: the Mantra GSC

Journal of the American Medical Informatics Association : JAMIA, 2015-09, Vol.22 (5), p.948-956 [Peer Reviewed Journal]

The Author 2015. Published by Oxford University Press on behalf of the American Medical Informatics Association. 2015 ;The Author 2015. Published by Oxford University Press on behalf of the American Medical Informatics Association. ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1093/jamia/ocv037 ;PMID: 25948699

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9
RobotReviewer: evaluation of a system for automatically assessing bias in clinical trials
RobotReviewer: evaluation of a system for automatically assessing bias in clinical trials
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RobotReviewer: evaluation of a system for automatically assessing bias in clinical trials

Journal of the American Medical Informatics Association : JAMIA, 2016-01, Vol.23 (1), p.193-201 [Peer Reviewed Journal]

The Author 2015. Published by Oxford University Press on behalf of the American Medical Informatics Association. 2015 ;The Author 2015. Published by Oxford University Press on behalf of the American Medical Informatics Association. ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1093/jamia/ocv044 ;PMID: 26104742

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10
Self-reported COVID-19 symptoms on Twitter: an analysis and a research resource
Self-reported COVID-19 symptoms on Twitter: an analysis and a research resource
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Self-reported COVID-19 symptoms on Twitter: an analysis and a research resource

Journal of the American Medical Informatics Association, 2020-08, Vol.27 (8), p.1310-1315 [Peer Reviewed Journal]

The Author(s) 2020. Published by Oxford University Press on behalf of the American Medical Informatics Association. 2020 ;The Author(s) 2020. Published by Oxford University Press on behalf of the American Medical Informatics Association. ;2020. This work is licensed under http://creativecommons.org/licenses/by-nc-nd/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;ISSN: 1527-974X ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1093/jamia/ocaa116 ;PMID: 32620975

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11
Electronic medical record phenotyping using the anchor and learn framework
Electronic medical record phenotyping using the anchor and learn framework
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Electronic medical record phenotyping using the anchor and learn framework

Journal of the American Medical Informatics Association : JAMIA, 2016-07, Vol.23 (4), p.731-740 [Peer Reviewed Journal]

The Author 2016. Published by Oxford University Press on behalf of the American Medical Informatics Association. 2016 ;The Author 2016. Published by Oxford University Press on behalf of the American Medical Informatics Association. ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1093/jamia/ocw011 ;PMID: 27107443

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12
Adverse drug events and medication relation extraction in electronic health records with ensemble deep learning methods
Adverse drug events and medication relation extraction in electronic health records with ensemble deep learning methods
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Adverse drug events and medication relation extraction in electronic health records with ensemble deep learning methods

Journal of the American Medical Informatics Association : JAMIA, 2020-01, Vol.27 (1), p.39-46 [Peer Reviewed Journal]

The Author(s) 2019. Published by Oxford University Press on behalf of the American Medical Informatics Association. 2019 ;The Author(s) 2019. Published by Oxford University Press on behalf of the American Medical Informatics Association. ;ISSN: 1527-974X ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1093/jamia/ocz101 ;PMID: 31390003

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13
Exploring relation types for literature-based discovery
Exploring relation types for literature-based discovery
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Exploring relation types for literature-based discovery

Journal of the American Medical Informatics Association : JAMIA, 2015-09, Vol.22 (5), p.987-992 [Peer Reviewed Journal]

The Author 2015. Published by Oxford University Press on behalf of the American Medical Informatics Association. 2015 ;The Author 2015. Published by Oxford University Press on behalf of the American Medical Informatics Association. ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1093/jamia/ocv002 ;PMID: 25971437

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14
Automated conversational agents for post-intervention follow-up: a systematic review
Automated conversational agents for post-intervention follow-up: a systematic review
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Automated conversational agents for post-intervention follow-up: a systematic review

BJS open, 2021-07, Vol.5 (4) [Peer Reviewed Journal]

The Author(s) 2021. Published by Oxford University Press on behalf of BJS Society Ltd. ;The Author(s) 2021. Published by Oxford University Press on behalf of BJS Society Ltd. 2021 ;ISSN: 2474-9842 ;EISSN: 2474-9842 ;DOI: 10.1093/bjsopen/zrab070 ;PMID: 34323916

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15
CancerBERT: a cancer domain-specific language model for extracting breast cancer phenotypes from electronic health records
CancerBERT: a cancer domain-specific language model for extracting breast cancer phenotypes from electronic health records
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CancerBERT: a cancer domain-specific language model for extracting breast cancer phenotypes from electronic health records

Journal of the American Medical Informatics Association : JAMIA, 2022-06, Vol.29 (7), p.1208-1216 [Peer Reviewed Journal]

The Author(s) 2022. Published by Oxford University Press on behalf of the American Medical Informatics Association. 2022 ;The Author(s) 2022. Published by Oxford University Press on behalf of the American Medical Informatics Association. ;ISSN: 1527-974X ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1093/jamia/ocac040 ;PMID: 35333345

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16
Sepsis prediction, early detection, and identification using clinical text for machine learning: a systematic review
Sepsis prediction, early detection, and identification using clinical text for machine learning: a systematic review
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Sepsis prediction, early detection, and identification using clinical text for machine learning: a systematic review

Journal of the American Medical Informatics Association : JAMIA, 2022-01, Vol.29 (3), p.559-575 [Peer Reviewed Journal]

The Author(s) 2021. Published by Oxford University Press on behalf of the American Medical Informatics Association. 2021 ;The Author(s) 2021. Published by Oxford University Press on behalf of the American Medical Informatics Association. ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1093/jamia/ocab236 ;PMID: 34897469

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17
Bias and fairness assessment of a natural language processing opioid misuse classifier: detection and mitigation of electronic health record data disadvantages across racial subgroups
Bias and fairness assessment of a natural language processing opioid misuse classifier: detection and mitigation of electronic health record data disadvantages across racial subgroups
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Bias and fairness assessment of a natural language processing opioid misuse classifier: detection and mitigation of electronic health record data disadvantages across racial subgroups

Journal of the American Medical Informatics Association : JAMIA, 2021-10, Vol.28 (11), p.2393-2403, Article 2393 [Peer Reviewed Journal]

The Author(s) 2021. Published by Oxford University Press on behalf of the American Medical Informatics Association. 2021 ;The Author(s) 2021. Published by Oxford University Press on behalf of the American Medical Informatics Association. ;ISSN: 1527-974X ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1093/jamia/ocab148 ;PMID: 34383925

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18
Automatic extraction of cancer registry reportable information from free-text pathology reports using multitask convolutional neural networks
Automatic extraction of cancer registry reportable information from free-text pathology reports using multitask convolutional neural networks
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Automatic extraction of cancer registry reportable information from free-text pathology reports using multitask convolutional neural networks

Journal of the American Medical Informatics Association : JAMIA, 2020-01, Vol.27 (1), p.89-98 [Peer Reviewed Journal]

The Author(s) 2019. Published by Oxford University Press on behalf of the American Medical Informatics Association. 2019 ;The Author(s) 2019. Published by Oxford University Press on behalf of the American Medical Informatics Association. ;ISSN: 1527-974X ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1093/jamia/ocz153 ;PMID: 31710668

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19
An artificial intelligence approach to COVID-19 infection risk assessment in virtual visits: A case report
An artificial intelligence approach to COVID-19 infection risk assessment in virtual visits: A case report
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An artificial intelligence approach to COVID-19 infection risk assessment in virtual visits: A case report

Journal of the American Medical Informatics Association : JAMIA, 2020-08, Vol.27 (8), p.1321-1325 [Peer Reviewed Journal]

The Author(s) 2020. Published by Oxford University Press on behalf of the American Medical Informatics Association. 2020 ;The Author(s) 2020. Published by Oxford University Press on behalf of the American Medical Informatics Association. ;ISSN: 1527-974X ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1093/jamia/ocaa105 ;PMID: 32449766

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20
Real world evidence in cardiovascular medicine: ensuring data validity in electronic health record-based studies
Real world evidence in cardiovascular medicine: ensuring data validity in electronic health record-based studies
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Real world evidence in cardiovascular medicine: ensuring data validity in electronic health record-based studies

Journal of the American Medical Informatics Association : JAMIA, 2019-11, Vol.26 (11), p.1189-1194 [Peer Reviewed Journal]

The Author(s) 2019. Published by Oxford University Press on behalf of the American Medical Informatics Association. 2019 ;The Author(s) 2019. Published by Oxford University Press on behalf of the American Medical Informatics Association. ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1093/jamia/ocz119 ;PMID: 31414700

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