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Material Type: Article
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So you think you can PLS-DA?BMC bioinformatics, 2020-12, Vol.21 (Suppl 1), p.2-2, Article 2 [Peer Reviewed Journal]COPYRIGHT 2020 BioMed Central Ltd. ;2020. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2020 ;ISSN: 1471-2105 ;EISSN: 1471-2105 ;DOI: 10.1186/s12859-019-3310-7 ;PMID: 33297937Full text available |
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Material Type: Article
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Statistical power for cluster analysisBMC bioinformatics, 2022-05, Vol.23 (1), p.205-205, Article 205 [Peer Reviewed Journal]2022. The Author(s). ;COPYRIGHT 2022 BioMed Central Ltd. ;2022. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2022 ;ISSN: 1471-2105 ;EISSN: 1471-2105 ;DOI: 10.1186/s12859-022-04675-1 ;PMID: 35641905Full text available |
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Material Type: Article
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CIDR: Ultrafast and accurate clustering through imputation for single-cell RNA-seq dataGenome Biology, 2017-03, Vol.18 (1), p.59-59, Article 59 [Peer Reviewed Journal]2017. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2017 ;ISSN: 1474-760X ;ISSN: 1474-7596 ;EISSN: 1474-760X ;DOI: 10.1186/s13059-017-1188-0 ;PMID: 28351406Full text available |
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4 |
Material Type: Article
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Pretata: predicting TATA binding proteins with novel features and dimensionality reduction strategyBMC systems biology, 2016-12, Vol.10 (Suppl 4), p.114-114, Article 114 [Peer Reviewed Journal]COPYRIGHT 2016 BioMed Central Ltd. ;COPYRIGHT 2016 BioMed Central Ltd. ;Copyright BioMed Central 2016 ;The Author(s). 2016 ;ISSN: 1752-0509 ;EISSN: 1752-0509 ;DOI: 10.1186/s12918-016-0353-5 ;PMID: 28155714Full text available |
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Material Type: Article
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A deep adversarial variational autoencoder model for dimensionality reduction in single-cell RNA sequencing analysisBMC bioinformatics, 2020-02, Vol.21 (1), p.64-64, Article 64 [Peer Reviewed Journal]COPYRIGHT 2020 BioMed Central Ltd. ;2020. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s). 2020 ;ISSN: 1471-2105 ;EISSN: 1471-2105 ;DOI: 10.1186/s12859-020-3401-5 ;PMID: 32085701Full text available |
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Material Type: Article
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Compressing gene expression data using multiple latent space dimensionalities learns complementary biological representationsGenome Biology, 2020-05, Vol.21 (1), p.109-109, Article 109 [Peer Reviewed Journal]2020. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2020 ;ISSN: 1474-760X ;ISSN: 1474-7596 ;EISSN: 1474-760X ;DOI: 10.1186/s13059-020-02021-3 ;PMID: 32393369Full text available |
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7 |
Material Type: Article
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An empirical fuzzy multifactor dimensionality reduction method for detecting gene-gene interactionsBMC genomics, 2017-03, Vol.18 (Suppl 2), p.115-115, Article 115 [Peer Reviewed Journal]Copyright BioMed Central 2017 ;2017. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s). 2017 ;ISSN: 1471-2164 ;EISSN: 1471-2164 ;DOI: 10.1186/s12864-017-3496-x ;PMID: 28361694Full text available |
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8 |
Material Type: Article
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An efficiency analysis of high-order combinations of gene-gene interactions using multifactor-dimensionality reductionBMC genomics, 2015-07, Vol.16 (1), p.489-489, Article 489 [Peer Reviewed Journal]COPYRIGHT 2015 BioMed Central Ltd. ;COPYRIGHT 2015 BioMed Central Ltd. ;Copyright BioMed Central 2015 ;Yang et al. 2015 ;ISSN: 1471-2164 ;EISSN: 1471-2164 ;DOI: 10.1186/s12864-015-1717-8 ;PMID: 26126977Full text available |
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9 |
Material Type: Article
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SuperCellCyto: enabling efficient analysis of large scale cytometry datasetsGenome Biology, 2024-04, Vol.25 (1), p.89-89 [Peer Reviewed Journal]2024. The Author(s). ;2024. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2024 ;ISSN: 1474-7596 ;EISSN: 1474-760X ;DOI: 10.1186/s13059-024-03229-3 ;PMID: 38589921Full text available |
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10 |
Material Type: Article
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GoM DE: interpreting structure in sequence count data with differential expression analysis allowing for grades of membershipGenome Biology, 2023-10, Vol.24 (1), p.236-236, Article 236 [Peer Reviewed Journal]2023. BioMed Central Ltd., part of Springer Nature. ;2023. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;BioMed Central Ltd., part of Springer Nature 2023 ;ISSN: 1474-760X ;ISSN: 1474-7596 ;EISSN: 1474-760X ;DOI: 10.1186/s13059-023-03067-9 ;PMID: 37858253Full text available |
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11 |
Material Type: Article
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Using transfer learning and dimensionality reduction techniques to improve generalisability of machine-learning predictions of mosquito ages from mid-infrared spectraBMC bioinformatics, 2023-01, Vol.24 (1), p.11-11, Article 11 [Peer Reviewed Journal]2023. The Author(s). ;COPYRIGHT 2023 BioMed Central Ltd. ;The Author(s) 2023 ;ISSN: 1471-2105 ;EISSN: 1471-2105 ;DOI: 10.1186/s12859-022-05128-5 ;PMID: 36624386Full text available |
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12 |
Material Type: Article
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Analysis of single-cell RNA sequencing data based on autoencodersBMC bioinformatics, 2021-06, Vol.22 (1), p.309-309, Article 309 [Peer Reviewed Journal]COPYRIGHT 2021 BioMed Central Ltd. ;2021. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2021 ;ISSN: 1471-2105 ;EISSN: 1471-2105 ;DOI: 10.1186/s12859-021-04150-3 ;PMID: 34103004Full text available |
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13 |
Material Type: Article
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Gene targeting in amyotrophic lateral sclerosis using causality-based feature selection and machine learningMolecular medicine (Cambridge, Mass.), 2023-01, Vol.29 (1), p.12-12, Article 12 [Peer Reviewed Journal]2023. The Author(s). ;The Author(s) 2023 ;ISSN: 1528-3658 ;ISSN: 1076-1551 ;EISSN: 1528-3658 ;DOI: 10.1186/s10020-023-00603-y ;PMID: 36694130Full text available |
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14 |
Material Type: Article
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The effect of data transformation on low-dimensional integration of single-cell RNA-seqBMC bioinformatics, 2024-04, Vol.25 (1), p.171-171 [Peer Reviewed Journal]2024. The Author(s). ;COPYRIGHT 2024 BioMed Central Ltd. ;2024. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2024 ;ISSN: 1471-2105 ;EISSN: 1471-2105 ;DOI: 10.1186/s12859-024-05788-5 ;PMID: 38689234Full text available |
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15 |
Material Type: Article
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Exploring combinations of dimensionality reduction, transfer learning, and regularization methods for predicting binary phenotypes with transcriptomic dataBMC bioinformatics, 2024-04, Vol.25 (1), p.167-167 [Peer Reviewed Journal]2024. The Author(s). ;COPYRIGHT 2024 BioMed Central Ltd. ;2024. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;ISSN: 1471-2105 ;EISSN: 1471-2105 ;DOI: 10.1186/s12859-024-05795-6 ;PMID: 38671342Full text available |
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16 |
Material Type: Article
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scBFA: modeling detection patterns to mitigate technical noise in large-scale single-cell genomics dataGenome Biology, 2019-09, Vol.20 (1), p.193-193, Article 193 [Peer Reviewed Journal]2019. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s). 2019 ;ISSN: 1474-760X ;ISSN: 1474-7596 ;EISSN: 1474-760X ;DOI: 10.1186/s13059-019-1806-0 ;PMID: 31500668Full text available |
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17 |
Material Type: Article
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FastProject: a tool for low-dimensional analysis of single-cell RNA-Seq dataBMC bioinformatics, 2016-08, Vol.17 (1), p.315-315, Article 315 [Peer Reviewed Journal]COPYRIGHT 2016 BioMed Central Ltd. ;Copyright BioMed Central 2016 ;The Author(s) 2016 ;ISSN: 1471-2105 ;EISSN: 1471-2105 ;DOI: 10.1186/s12859-016-1176-5 ;PMID: 27553427Full text available |
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18 |
Material Type: Article
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Neural manifold analysis of brain circuit dynamics in health and diseaseJournal of computational neuroscience, 2023-02, Vol.51 (1), p.1-21 [Peer Reviewed Journal]The Author(s) 2022 ;2022. The Author(s). ;The Author(s) 2022. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;ISSN: 0929-5313 ;EISSN: 1573-6873 ;DOI: 10.1007/s10827-022-00839-3 ;PMID: 36522604Full text available |
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19 |
Material Type: Article
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Dynamic modeling of photoacoustic sensor data to classify human blood samplesMedical & biological engineering & computing, 2024-02, Vol.62 (2), p.389-403 [Peer Reviewed Journal]The Author(s) 2023 ;ISSN: 0140-0118 ;EISSN: 1741-0444 ;DOI: 10.1007/s11517-023-02939-3Digital Resources/Online E-Resources |
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20 |
Material Type: Article
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Core patient-reported outcome measures for chronic pain patients treated with spinal cord stimulation or dorsal root ganglia stimulationHealth and quality of life outcomes, 2023-07, Vol.21 (1), p.77-77 [Peer Reviewed Journal]2023. The Author(s). ;COPYRIGHT 2023 BioMed Central Ltd. ;2023. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2023 ;ISSN: 1477-7525 ;EISSN: 1477-7525 ;DOI: 10.1186/s12955-023-02158-2 ;PMID: 37474950Full text available |