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Material Type: Article
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Modern deep learning in bioinformaticsJournal of molecular cell biology, 2021-02, Vol.12 (11), p.823-827 [Peer Reviewed Journal]The Author(s) (2020). Published by Oxford University Press on behalf of Journal of Molecular Cell Biology , IBCB, SIBS, CAS. 2020 ;The Author(s) (2020). Published by Oxford University Press on behalf of , IBCB, SIBS, CAS. 2020 ;ISSN: 1674-2788 ;EISSN: 1759-4685 ;DOI: 10.1093/jmcb/mjaa030 ;PMID: 32573721Full text available |
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GTDB-Tk: a toolkit to classify genomes with the Genome Taxonomy DatabaseBioinformatics, 2019-11, Vol.36 (6), p.1925-1927 [Peer Reviewed Journal]The Author(s) 2019. Published by Oxford University Press. 2019 ;The Author(s) 2019. Published by Oxford University Press. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btz848 ;PMID: 31730192Full text available |
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3 |
Material Type: Article
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Remote data collection for public health research in a COVID-19 era: ethical implications, challenges and opportunitiesHealth policy and planning, 2021-04 [Peer Reviewed Journal]The Author(s) 2021. Published by Oxford University Press in association with The London School of Hygiene and Tropical Medicine. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com 2021 ;ISSN: 0268-1080 ;EISSN: 1460-2237 ;DOI: 10.1093/heapol/czaa158 ;PMID: 33881138 ;PMID: 33550406Full text available |
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Material Type: Article
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Marking RNA: m6A writers, readers, and functions in ArabidopsisJournal of molecular cell biology, 2019-10, Vol.11 (10), p.899-910 [Peer Reviewed Journal]The Author(s) (2019). Published by Oxford University Press on behalf of Journal of Molecular Cell Biology, IBCB, SIBS, CAS. ;The Author(s) (2019). Published by Oxford University Press on behalf of , IBCB, SIBS, CAS. 2019 ;ISSN: 1759-4685 ;ISSN: 1674-2788 ;EISSN: 1759-4685 ;DOI: 10.1093/jmcb/mjz085 ;PMID: 31336387Full text available |
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5 |
Material Type: Article
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GTDB-Tk v2: memory friendly classification with the genome taxonomy databaseBioinformatics (Oxford, England), 2022-11, Vol.38 (23), p.5315-5316 [Peer Reviewed Journal]The Author(s) 2022. Published by Oxford University Press. ;The Author(s) 2022. Published by Oxford University Press. 2022 ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btac672 ;PMID: 36218463Full text available |
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6 |
Material Type: Article
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GraphDTA: predicting drug–target binding affinity with graph neural networksBioinformatics, 2021-05, Vol.37 (8), p.1140-1147 [Peer Reviewed Journal]The Author(s) 2020. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com 2020 ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btaa921Full text available |
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Material Type: Article
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Twenty Years of the SENTRY Antifungal Surveillance Program: Results for Candida Species From 1997–2016Open forum infectious diseases, 2019-03, Vol.6 (Supplement_1), p.S79-S94 [Peer Reviewed Journal]The Author(s) 2019. Published by Oxford University Press on behalf of Infectious Diseases Society of America. 2019 ;ISSN: 2328-8957 ;EISSN: 2328-8957 ;DOI: 10.1093/ofid/ofy358 ;PMID: 30895218Full text available |
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8 |
Material Type: Article
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Mitochondrial ROS promote macrophage pyroptosis by inducing GSDMD oxidationJournal of molecular cell biology, 2019-12, Vol.11 (12), p.1069-1082 [Peer Reviewed Journal]The Author(s) (2019). Published by Oxford University Press on behalf of Journal of Molecular Cell Biology, IBCB, SIBS, CAS. ;The Author(s) (2019). Published by Oxford University Press on behalf of , IBCB, SIBS, CAS. 2019 ;ISSN: 1759-4685 ;ISSN: 1674-2788 ;EISSN: 1759-4685 ;DOI: 10.1093/jmcb/mjz020 ;PMID: 30860577Full text available |
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9 |
Material Type: Article
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BioBERT: a pre-trained biomedical language representation model for biomedical text miningBioinformatics, 2020-02, Vol.36 (4), p.1234-1240 [Peer Reviewed Journal]The Author(s) 2019. Published by Oxford University Press. 2019 ;The Author(s) 2019. Published by Oxford University Press. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btz682 ;PMID: 31501885Full text available |
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10 |
Material Type: Article
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BioGPT: generative pre-trained transformer for biomedical text generation and miningBriefings in bioinformatics, 2022-11, Vol.23 (6) [Peer Reviewed Journal]The Author(s) 2022. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com. ;ISSN: 1467-5463 ;EISSN: 1477-4054 ;DOI: 10.1093/bib/bbac409 ;PMID: 36156661Full text available |
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11 |
Material Type: Article
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Graph embedding on biomedical networks: methods, applications and evaluationsBioinformatics, 2020-02, Vol.36 (4), p.1241-1251 [Peer Reviewed Journal]The Author(s) 2019. Published by Oxford University Press. 2019 ;The Author(s) 2019. Published by Oxford University Press. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btz718 ;PMID: 31584634Full text available |
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12 |
Material Type: Article
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RAxML-NG: a fast, scalable and user-friendly tool for maximum likelihood phylogenetic inferenceBioinformatics, 2019-11, Vol.35 (21), p.4453-4455 [Peer Reviewed Journal]The Author(s) 2019. Published by Oxford University Press. 2019 ;The Author(s) 2019. Published by Oxford University Press. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btz305 ;PMID: 31070718Full text available |
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13 |
Material Type: Article
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No-take marine reserves are the most effective protected areas in the oceanICES journal of marine science, 2018-05, Vol.75 (3), p.1166-1168 [Peer Reviewed Journal]International Council for the Exploration of the Sea 2017. All rights reserved. For Permissions, please email: journals.permissions@oup.com 2017 ;ISSN: 1054-3139 ;EISSN: 1095-9289 ;DOI: 10.1093/icesjms/fsx059Full text available |
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14 |
Material Type: Article
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Scaling tree-based automated machine learning to biomedical big data with a feature set selectorBioinformatics, 2020-01, Vol.36 (1), p.250-256 [Peer Reviewed Journal]The Author(s) 2019. Published by Oxford University Press. 2019 ;The Author(s) 2019. Published by Oxford University Press. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btz470 ;PMID: 31165141Full text available |
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15 |
Material Type: Article
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Cancer statistics: a comparison between World Health Organization (WHO) and Global Burden of Disease (GBD)European journal of public health, 2020-10, Vol.30 (5), p.1026-1027 [Peer Reviewed Journal]The Author(s) 2019. Published by Oxford University Press on behalf of the European Public Health Association. All rights reserved. ;ISSN: 1101-1262 ;EISSN: 1464-360X ;DOI: 10.1093/eurpub/ckz216Full text available |
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16 |
Material Type: Article
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Expression profile of immune checkpoint genes and their roles in predicting immunotherapy responseBriefings in bioinformatics, 2021-05, Vol.22 (3) [Peer Reviewed Journal]ISSN: 1467-5463 ;EISSN: 1477-4054 ;DOI: 10.1093/bib/bbaa176Full text available |
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17 |
Material Type: Article
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fastp: an ultra-fast all-in-one FASTQ preprocessorBioinformatics, 2018-09, Vol.34 (17), p.i884-i890 [Peer Reviewed Journal]The Author(s) 2018. Published by Oxford University Press. 2018 ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty560 ;PMID: 30423086Full text available |
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18 |
Material Type: Article
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Minimap2: pairwise alignment for nucleotide sequencesBioinformatics, 2018-09, Vol.34 (18), p.3094-3100 [Peer Reviewed Journal]The Author(s) 2018. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com 2018 ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty191 ;PMID: 29750242Full text available |
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19 |
Material Type: Article
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ape 5.0: an environment for modern phylogenetics and evolutionary analyses in RBioinformatics, 2019-02, Vol.35 (3), p.526-528 [Peer Reviewed Journal]The Author(s) 2018. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com 2018 ;Distributed under a Creative Commons Attribution 4.0 International License ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty633 ;PMID: 30016406Full text available |
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20 |
Material Type: Article
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TISIDB: an integrated repository portal for tumor–immune system interactionsBioinformatics, 2019-10, Vol.35 (20), p.4200-4202 [Peer Reviewed Journal]The Author(s) 2019. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com 2019 ;The Author(s) (2019). Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btz210 ;PMID: 30903160Full text available |