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1
Transcriptome profiling of mouse samples using nanopore sequencing of cDNA and RNA molecules
Transcriptome profiling of mouse samples using nanopore sequencing of cDNA and RNA molecules
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Transcriptome profiling of mouse samples using nanopore sequencing of cDNA and RNA molecules

Scientific reports, 2019-10, Vol.9 (1), p.14908-12, Article 14908 [Peer Reviewed Journal]

2019. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;Distributed under a Creative Commons Attribution 4.0 International License ;The Author(s) 2019 ;ISSN: 2045-2322 ;EISSN: 2045-2322 ;DOI: 10.1038/s41598-019-51470-9 ;PMID: 31624302

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2
Droplet based whole genome amplification for sequencing minute amounts of purified Mycobacterium tuberculosis DNA
Droplet based whole genome amplification for sequencing minute amounts of purified Mycobacterium tuberculosis DNA
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Droplet based whole genome amplification for sequencing minute amounts of purified Mycobacterium tuberculosis DNA

Scientific reports, 2024-04, Vol.14 (1), p.9931-9931 [Peer Reviewed Journal]

2024. The Author(s). ;The Author(s) 2024. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2024 ;EISSN: 2045-2322 ;DOI: 10.1038/s41598-024-60545-1 ;PMID: 38689002

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3
Systematic comparison of germline variant calling pipelines cross multiple next-generation sequencers
Systematic comparison of germline variant calling pipelines cross multiple next-generation sequencers
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Systematic comparison of germline variant calling pipelines cross multiple next-generation sequencers

Scientific reports, 2019-06, Vol.9 (1), p.9345-13, Article 9345 [Peer Reviewed Journal]

2019. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2019 ;ISSN: 2045-2322 ;EISSN: 2045-2322 ;DOI: 10.1038/s41598-019-45835-3 ;PMID: 31249349

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4
Systematic dissection of biases in whole-exome and whole-genome sequencing reveals major determinants of coding sequence coverage
Systematic dissection of biases in whole-exome and whole-genome sequencing reveals major determinants of coding sequence coverage
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Systematic dissection of biases in whole-exome and whole-genome sequencing reveals major determinants of coding sequence coverage

Scientific reports, 2020-02, Vol.10 (1), p.2057-2057, Article 2057 [Peer Reviewed Journal]

This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2020 ;ISSN: 2045-2322 ;EISSN: 2045-2322 ;DOI: 10.1038/s41598-020-59026-y ;PMID: 32029882

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5
Comparison of GATK and DeepVariant by trio sequencing
Comparison of GATK and DeepVariant by trio sequencing
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Comparison of GATK and DeepVariant by trio sequencing

Scientific reports, 2022-02, Vol.12 (1), p.1809-1809, Article 1809 [Peer Reviewed Journal]

2022. The Author(s). ;The Author(s) 2022. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2022 ;ISSN: 2045-2322 ;EISSN: 2045-2322 ;DOI: 10.1038/s41598-022-05833-4 ;PMID: 35110657

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6
Microbial community structure and dynamics in thermophilic composting viewed through metagenomics and metatranscriptomics
Microbial community structure and dynamics in thermophilic composting viewed through metagenomics and metatranscriptomics
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Microbial community structure and dynamics in thermophilic composting viewed through metagenomics and metatranscriptomics

Scientific reports, 2016-12, Vol.6 (1), p.38915-38915, Article 38915 [Peer Reviewed Journal]

Copyright Nature Publishing Group Dec 2016 ;Copyright © 2016, The Author(s) 2016 The Author(s) ;ISSN: 2045-2322 ;EISSN: 2045-2322 ;DOI: 10.1038/srep38915 ;PMID: 27941956

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7
3D cell culture stimulates the secretion of in vivo like extracellular vesicles
3D cell culture stimulates the secretion of in vivo like extracellular vesicles
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3D cell culture stimulates the secretion of in vivo like extracellular vesicles

Scientific reports, 2019-09, Vol.9 (1), p.13012-14, Article 13012 [Peer Reviewed Journal]

2019. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2019 ;ISSN: 2045-2322 ;EISSN: 2045-2322 ;DOI: 10.1038/s41598-019-49671-3 ;PMID: 31506601

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8
Rapid, multiplexed, whole genome and plasmid sequencing of foodborne pathogens using long-read nanopore technology
Rapid, multiplexed, whole genome and plasmid sequencing of foodborne pathogens using long-read nanopore technology
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Rapid, multiplexed, whole genome and plasmid sequencing of foodborne pathogens using long-read nanopore technology

Scientific reports, 2019-11, Vol.9 (1), p.16350-11, Article 16350 [Peer Reviewed Journal]

2019. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2019 ;ISSN: 2045-2322 ;EISSN: 2045-2322 ;DOI: 10.1038/s41598-019-52424-x ;PMID: 31704961

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9
Author Correction: Low-coverage whole-genome sequencing of extracellular vesicle-associated DNA in patients with metastatic cancer
Author Correction: Low-coverage whole-genome sequencing of extracellular vesicle-associated DNA in patients with metastatic cancer
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Author Correction: Low-coverage whole-genome sequencing of extracellular vesicle-associated DNA in patients with metastatic cancer

Scientific reports, 2021-07, Vol.11 (1), p.15616-15616, Article 15616 [Peer Reviewed Journal]

The Author(s) 2021. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2021 ;ISSN: 2045-2322 ;EISSN: 2045-2322 ;DOI: 10.1038/s41598-021-94496-8 ;PMID: 34315953

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10
Molecular characterization of similar Hb Lepore Boston-Washington in four Chinese families using third generation sequencing
Molecular characterization of similar Hb Lepore Boston-Washington in four Chinese families using third generation sequencing
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Molecular characterization of similar Hb Lepore Boston-Washington in four Chinese families using third generation sequencing

Scientific reports, 2024-04, Vol.14 (1), p.9966-9966 [Peer Reviewed Journal]

2024. The Author(s). ;The Author(s) 2024. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2024 ;EISSN: 2045-2322 ;DOI: 10.1038/s41598-024-60604-7 ;PMID: 38693200

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11
A multi-omics analysis-based model to predict the prognosis of low-grade gliomas
A multi-omics analysis-based model to predict the prognosis of low-grade gliomas
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A multi-omics analysis-based model to predict the prognosis of low-grade gliomas

Scientific reports, 2024-04, Vol.14 (1), p.9427-9427 [Peer Reviewed Journal]

2024. The Author(s). ;The Author(s) 2024. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2024 ;EISSN: 2045-2322 ;DOI: 10.1038/s41598-024-58434-8 ;PMID: 38658591

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12
Enhancing diversity analysis by repeatedly rarefying next generation sequencing data describing microbial communities
Enhancing diversity analysis by repeatedly rarefying next generation sequencing data describing microbial communities
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Enhancing diversity analysis by repeatedly rarefying next generation sequencing data describing microbial communities

Scientific reports, 2021-11, Vol.11 (1), p.22302-13, Article 22302 [Peer Reviewed Journal]

2021. The Author(s). ;The Author(s) 2021. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2021 ;ISSN: 2045-2322 ;EISSN: 2045-2322 ;DOI: 10.1038/s41598-021-01636-1 ;PMID: 34785722

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13
Evaluation of Oxford Nanopore's MinION Sequencing Device for Microbial Whole Genome Sequencing Applications
Evaluation of Oxford Nanopore's MinION Sequencing Device for Microbial Whole Genome Sequencing Applications
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Evaluation of Oxford Nanopore's MinION Sequencing Device for Microbial Whole Genome Sequencing Applications

Scientific reports, 2018-07, Vol.8 (1), p.10931-12, Article 10931 [Peer Reviewed Journal]

2018. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2018 ;ISSN: 2045-2322 ;EISSN: 2045-2322 ;DOI: 10.1038/s41598-018-29334-5 ;PMID: 30026559

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14
Investigating the genetic makeup of the major histocompatibility complex (MHC) in the United Arab Emirates population through next-generation sequencing
Investigating the genetic makeup of the major histocompatibility complex (MHC) in the United Arab Emirates population through next-generation sequencing
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Investigating the genetic makeup of the major histocompatibility complex (MHC) in the United Arab Emirates population through next-generation sequencing

Scientific reports, 2024-02, Vol.14 (1), p.3392-3392 [Peer Reviewed Journal]

2024. The Author(s). ;The Author(s) 2024. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;EISSN: 2045-2322 ;DOI: 10.1038/s41598-024-53986-1 ;PMID: 38337023

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15
BPGA- an ultra-fast pan-genome analysis pipeline
BPGA- an ultra-fast pan-genome analysis pipeline
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BPGA- an ultra-fast pan-genome analysis pipeline

Scientific reports, 2016-04, Vol.6 (1), p.24373-24373, Article 24373 [Peer Reviewed Journal]

Copyright Nature Publishing Group Apr 2016 ;Copyright © 2016, Macmillan Publishers Limited 2016 Macmillan Publishers Limited ;ISSN: 2045-2322 ;EISSN: 2045-2322 ;DOI: 10.1038/srep24373 ;PMID: 27071527

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16
Rapid identification of pathogens, antibiotic resistance genes and plasmids in blood cultures by nanopore sequencing
Rapid identification of pathogens, antibiotic resistance genes and plasmids in blood cultures by nanopore sequencing
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Rapid identification of pathogens, antibiotic resistance genes and plasmids in blood cultures by nanopore sequencing

Scientific reports, 2020-05, Vol.10 (1), p.7622-7622, Article 7622 [Peer Reviewed Journal]

The Author(s) 2020. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2020. corrected publication 2023. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;info:eu-repo/semantics/openAccess ;The Author(s) 2020 ;ISSN: 2045-2322 ;EISSN: 2045-2322 ;DOI: 10.1038/s41598-020-64616-x ;PMID: 32376847

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17
Towards accurate indel calling for oncopanel sequencing through an international pipeline competition at precisionFDA
Towards accurate indel calling for oncopanel sequencing through an international pipeline competition at precisionFDA
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Towards accurate indel calling for oncopanel sequencing through an international pipeline competition at precisionFDA

Scientific reports, 2024-04, Vol.14 (1), p.8165-8165 [Peer Reviewed Journal]

2024. This is a U.S. Government work and not under copyright protection in the US; foreign copyright protection may apply. ;This is a U.S. Government work and not under copyright protection in the US; foreign copyright protection may apply 2024. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;This is a U.S. Government work and not under copyright protection in the US; foreign copyright protection may apply 2024 ;EISSN: 2045-2322 ;DOI: 10.1038/s41598-024-58573-y ;PMID: 38589653

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18
Whole-genome sequencing of Ganoderma boninense, the causal agent of basal stem rot disease in oil palm, via combined short- and long-read sequencing
Whole-genome sequencing of Ganoderma boninense, the causal agent of basal stem rot disease in oil palm, via combined short- and long-read sequencing
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Whole-genome sequencing of Ganoderma boninense, the causal agent of basal stem rot disease in oil palm, via combined short- and long-read sequencing

Scientific reports, 2024-05, Vol.14 (1), p.10520-10520 [Peer Reviewed Journal]

2024. The Author(s). ;The Author(s) 2024. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2024 ;EISSN: 2045-2322 ;DOI: 10.1038/s41598-024-60713-3 ;PMID: 38714765

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19
Author Correction: Next Generation Sequencing of Pooled Samples: Guideline for Variants' Filtering
Author Correction: Next Generation Sequencing of Pooled Samples: Guideline for Variants' Filtering
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Author Correction: Next Generation Sequencing of Pooled Samples: Guideline for Variants' Filtering

Scientific reports, 2020-03, Vol.10 (1), p.5517-5517, Article 5517 [Peer Reviewed Journal]

This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2020 ;ISSN: 2045-2322 ;EISSN: 2045-2322 ;DOI: 10.1038/s41598-020-62214-5 ;PMID: 32251337

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20
DEEPOMICS FFPE, a deep neural network model, identifies DNA sequencing artifacts from formalin fixed paraffin embedded tissue with high accuracy
DEEPOMICS FFPE, a deep neural network model, identifies DNA sequencing artifacts from formalin fixed paraffin embedded tissue with high accuracy
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DEEPOMICS FFPE, a deep neural network model, identifies DNA sequencing artifacts from formalin fixed paraffin embedded tissue with high accuracy

Scientific reports, 2024-01, Vol.14 (1), p.2559-2559, Article 2559 [Peer Reviewed Journal]

2024. The Author(s). ;The Author(s) 2024. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2024 ;ISSN: 2045-2322 ;EISSN: 2045-2322 ;DOI: 10.1038/s41598-024-53167-0 ;PMID: 38297116

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