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| Result Number | Material Type | Add to My Shelf Action | Record Details and Options |
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| 1 |
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MaxBin 2.0: an automated binning algorithm to recover genomes from multiple metagenomic datasetsBioinformatics, 2016-02, Vol.32 (4), p.605-607 [Peer Reviewed Journal]The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com. ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;EISSN: 1460-2059 ;DOI: 10.1093/bioinformatics/btv638 ;PMID: 26515820Full text available |
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RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogeniesBioinformatics, 2014-05, Vol.30 (9), p.1312-1313 [Peer Reviewed Journal]The Author 2014. Published by Oxford University Press. 2014 ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btu033 ;PMID: 24451623Full text available |
| 3 |
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PyNAST: a flexible tool for aligning sequences to a template alignmentBioinformatics, 2010-01, Vol.26 (2), p.266-267 [Peer Reviewed Journal]The Author(s) 2009. Published by Oxford University Press. 2009 ;2015 INIST-CNRS ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btp636 ;PMID: 19914921Full text available |
| 4 |
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GROMACS 4.5: a high-throughput and highly parallel open source molecular simulation toolkitBioinformatics, 2013-04, Vol.29 (7), p.845-854 [Peer Reviewed Journal]The Author 2013. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com 2013 ;ISSN: 1367-4803 ;ISSN: 1367-4811 ;EISSN: 1367-4811 ;EISSN: 1460-2059 ;DOI: 10.1093/bioinformatics/btt055 ;PMID: 23407358Full text available |
| 5 |
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RAxML-NG: a fast, scalable and user-friendly tool for maximum likelihood phylogenetic inferenceBioinformatics, 2019-11, Vol.35 (21), p.4453-4455 [Peer Reviewed Journal]The Author(s) 2019. Published by Oxford University Press. 2019 ;The Author(s) 2019. Published by Oxford University Press. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btz305 ;PMID: 31070718Full text available |
| 6 |
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fastp: an ultra-fast all-in-one FASTQ preprocessorBioinformatics, 2018-09, Vol.34 (17), p.i884-i890 [Peer Reviewed Journal]The Author(s) 2018. Published by Oxford University Press. 2018 ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty560 ;PMID: 30423086Full text available |
| 7 |
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Minimap2: pairwise alignment for nucleotide sequencesBioinformatics, 2018-09, Vol.34 (18), p.3094-3100 [Peer Reviewed Journal]The Author(s) 2018. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com 2018 ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty191 ;PMID: 29750242Full text available |
| 8 |
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TISIDB: an integrated repository portal for tumor–immune system interactionsBioinformatics, 2019-10, Vol.35 (20), p.4200-4202 [Peer Reviewed Journal]The Author(s) 2019. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com 2019 ;The Author(s) (2019). Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btz210 ;PMID: 30903160Full text available |
| 9 |
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Nextstrain: real-time tracking of pathogen evolutionBioinformatics, 2018-12, Vol.34 (23), p.4121-4123 [Peer Reviewed Journal]The Author(s) 2018. Published by Oxford University Press. 2018 ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty407 ;PMID: 29790939Full text available |
| 10 |
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CD-HIT: accelerated for clustering the next-generation sequencing dataBioinformatics, 2012-12, Vol.28 (23), p.3150-3152 [Peer Reviewed Journal]2014 INIST-CNRS ;The Author 2012. Published by Oxford University Press. 2012 ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;EISSN: 1460-2059 ;DOI: 10.1093/bioinformatics/bts565 ;PMID: 23060610Full text available |
| 11 |
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GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research—an updateBioinformatics (Oxford, England), 2012-10, Vol.28 (19), p.2537-2539 [Peer Reviewed Journal]2015 INIST-CNRS ;The Author(s) 2012. Published by Oxford University Press. 2012 ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bts460 ;PMID: 22820204Full text available |
| 12 |
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KofamKOALA: KEGG Ortholog assignment based on profile HMM and adaptive score thresholdBioinformatics, 2020-04, Vol.36 (7), p.2251-2252 [Peer Reviewed Journal]The Author(s) 2019. Published by Oxford University Press. 2019 ;The Author(s) 2019. Published by Oxford University Press. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btz859 ;PMID: 31742321Full text available |
| 13 |
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VarSome: the human genomic variant search engineBioinformatics (Oxford, England), 2019-06, Vol.35 (11), p.1978-1980 [Peer Reviewed Journal]The Author(s) 2018. Published by Oxford University Press. ;The Author(s) 2018. Published by Oxford University Press. 2018 ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty897 ;PMID: 30376034Full text available |
| 14 |
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clinker & clustermap.js: automatic generation of gene cluster comparison figuresBioinformatics (Oxford, England), 2021-08, Vol.37 (16), p.2473-2475 [Peer Reviewed Journal]The Author(s) 2021. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com 2021 ;The Author(s) 2021. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com. ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btab007 ;PMID: 33459763Full text available |
| 15 |
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Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence dataBioinformatics (Oxford, England), 2012-06, Vol.28 (12), p.1647-1649 [Peer Reviewed Journal]2015 INIST-CNRS ;The Author(s) 2012. Published by Oxford University Press. 2012 ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bts199 ;PMID: 22543367Full text available |
| 16 |
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Identifying and removing haplotypic duplication in primary genome assembliesBioinformatics, 2020-05, Vol.36 (9), p.2896-2898 [Peer Reviewed Journal]The Author(s) 2020. Published by Oxford University Press. 2020 ;The Author(s) 2020. Published by Oxford University Press. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btaa025 ;PMID: 31971576Full text available |
| 17 |
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NanoPack: visualizing and processing long-read sequencing dataBioinformatics, 2018-08, Vol.34 (15), p.2666-2669 [Peer Reviewed Journal]The Author(s) 2018. Published by Oxford University Press. 2018 ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty149 ;PMID: 29547981Full text available |
| 18 |
Material Type: Article
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Heavy-tailed prior distributions for sequence count data: removing the noise and preserving large differencesBioinformatics (Oxford, England), 2019-06, Vol.35 (12), p.2084-2092 [Peer Reviewed Journal]The Author(s) 2018. Published by Oxford University Press. ;The Author(s) 2018. Published by Oxford University Press. 2018 ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty895 ;PMID: 30395178Full text available |
| 19 |
Material Type: Article
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PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format filesBioinformatics, 2019-05, Vol.35 (10), p.1786-1788 [Peer Reviewed Journal]The Author(s) 2018. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com 2018 ;The Author(s) 2018. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty875 ;PMID: 30321304Full text available |
| 20 |
Material Type: Article
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NextPolish: a fast and efficient genome polishing tool for long-read assemblyBioinformatics, 2020-04, Vol.36 (7), p.2253-2255 [Peer Reviewed Journal]The Author(s) 2019. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com 2019 ;The Author(s) 2019. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btz891 ;PMID: 31778144Full text available |
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