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subject: Optimization

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1	Material Type: Article	Dynamic compensation, parameter identifiability, and equivariances PLoS computational biology, 2017-04, Vol.13 (4), p.e1005447-e1005447 [Peer Reviewed Journal] COPYRIGHT 2017 Public Library of Science ;COPYRIGHT 2017 Public Library of Science ;2017 Public Library of Science. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Sontag ED (2017) Dynamic compensation, parameter identifiability, and equivariances. PLoS Comput Biol 13(4): e1005447. https://doi.org/10.1371/journal.pcbi.1005447 ;2017 Eduardo D. Sontag 2017 Eduardo D. Sontag ;2017 Public Library of Science. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Sontag ED (2017) Dynamic compensation, parameter identifiability, and equivariances. PLoS Comput Biol 13(4): e1005447. https://doi.org/10.1371/journal.pcbi.1005447 ;ISSN: 1553-7358 ;ISSN: 1553-734X ;EISSN: 1553-7358 ;DOI: 10.1371/journal.pcbi.1005447 ;PMID: 28384175 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
2	Material Type: Article	DeNovo: virus-host sequence-based protein-protein interaction prediction Bioinformatics, 2016-04, Vol.32 (8), p.1144-1150 [Peer Reviewed Journal] The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com. ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;EISSN: 1460-2059 ;DOI: 10.1093/bioinformatics/btv737 ;PMID: 26677965 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
3	Material Type: Article	PrimerDesign-M: a multiple-alignment based multiple-primer design tool for walking across variable genomes Bioinformatics, 2015-05, Vol.31 (9), p.1472-1474 [Peer Reviewed Journal] Published by Oxford University Press 2014. This work is written by US Government employees and is in the public domain in the US. ;Published by Oxford University Press 2014. This work is written by US Government employees and is in the public domain in the US. 2014 ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;EISSN: 1460-2059 ;DOI: 10.1093/bioinformatics/btu832 ;PMID: 25524896 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
4	Material Type: Article	Cutoff Finder: a comprehensive and straightforward Web application enabling rapid biomarker cutoff optimization PloS one, 2012-12, Vol.7 (12), p.e51862-e51862 [Peer Reviewed Journal] COPYRIGHT 2012 Public Library of Science ;COPYRIGHT 2012 Public Library of Science ;2012 Budczies et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: https://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2012 Budczies et al 2012 Budczies et al ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0051862 ;PMID: 23251644 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
5	Material Type: Article	Advanced arithmetic optimization algorithm for solving mechanical engineering design problems PloS one, 2021-08, Vol.16 (8), p.e0255703-e0255703 [Peer Reviewed Journal] COPYRIGHT 2021 Public Library of Science ;2021 Agushaka, Ezugwu. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2021 Agushaka, Ezugwu 2021 Agushaka, Ezugwu ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0255703 ;PMID: 34428219 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
6	Material Type: Article	From elementary flux modes to elementary flux vectors: Metabolic pathway analysis with arbitrary linear flux constraints PLoS computational biology, 2017-04, Vol.13 (4), p.e1005409-e1005409 [Peer Reviewed Journal] COPYRIGHT 2017 Public Library of Science ;COPYRIGHT 2017 Public Library of Science ;2017 Public Library of Science. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Klamt S, Regensburger G, Gerstl MP, Jungreuthmayer C, Schuster S, Mahadevan R, et al. (2017) From elementary flux modes to elementary flux vectors: Metabolic pathway analysis with arbitrary linear flux constraints. PLoS Comput Biol 13(4): e1005409. https://doi.org/10.1371/journal.pcbi.1005409 ;2017 Klamt et al 2017 Klamt et al ;2017 Public Library of Science. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Klamt S, Regensburger G, Gerstl MP, Jungreuthmayer C, Schuster S, Mahadevan R, et al. (2017) From elementary flux modes to elementary flux vectors: Metabolic pathway analysis with arbitrary linear flux constraints. PLoS Comput Biol 13(4): e1005409. https://doi.org/10.1371/journal.pcbi.1005409 ;ISSN: 1553-7358 ;ISSN: 1553-734X ;EISSN: 1553-7358 ;DOI: 10.1371/journal.pcbi.1005409 ;PMID: 28406903 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
7	Material Type: Article	A CROC stronger than ROC: measuring, visualizing and optimizing early retrieval Bioinformatics, 2010-05, Vol.26 (10), p.1348-1356 [Peer Reviewed Journal] 2015 INIST-CNRS ;The Author 2010. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org 2010 ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btq140 ;PMID: 20378557 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
8	Material Type: Article	Optimal deployment of resources for maximizing impact in spreading processes Proceedings of the National Academy of Sciences - PNAS, 2017-09, Vol.114 (39), p.E8138-E8146 [Peer Reviewed Journal] Volumes 1–89 and 106–114, copyright as a collective work only; author(s) retains copyright to individual articles ;Copyright National Academy of Sciences Sep 26, 2017 ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.1614694114 ;PMID: 28900013 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
9	Material Type: Article	Emergence of robust growth laws from optimal regulation of ribosome synthesis Molecular systems biology, 2014-08, Vol.10 (8), p.747-n/a [Peer Reviewed Journal] 2014 The Authors. Published under the terms of the CC BY 4.0 license ;2014 The Authors. Published under the terms of the CC BY 4.0 license. ;2014 EMBO ;2014. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2014 The Authors. Published under the terms of the CC BY 4.0 license 2014 ;ISSN: 1744-4292 ;EISSN: 1744-4292 ;DOI: 10.15252/msb.20145379 ;PMID: 25149558 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
10	Material Type: Article	State-dependent metabolic partitioning and energy conservation: A theoretical framework for understanding the function of sleep PloS one, 2017-10, Vol.12 (10), p.e0185746-e0185746 [Peer Reviewed Journal] COPYRIGHT 2017 Public Library of Science ;COPYRIGHT 2017 Public Library of Science ;2017 Schmidt et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2017 Schmidt et al 2017 Schmidt et al ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0185746 ;PMID: 29016625 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
11	Material Type: Article	Slow manifolds within network dynamics encode working memory efficiently and robustly PLoS computational biology, 2021-09, Vol.17 (9), p.e1009366-e1009366 [Peer Reviewed Journal] COPYRIGHT 2021 Public Library of Science ;2021 Ghazizadeh, Ching. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2021 Ghazizadeh, Ching 2021 Ghazizadeh, Ching ;ISSN: 1553-7358 ;ISSN: 1553-734X ;EISSN: 1553-7358 ;DOI: 10.1371/journal.pcbi.1009366 ;PMID: 34525089 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
12	Material Type: Article	Multi-objective AGV scheduling in an FMS using a hybrid of genetic algorithm and particle swarm optimization PloS one, 2017-03, Vol.12 (3), p.e0169817-e0169817 [Peer Reviewed Journal] COPYRIGHT 2017 Public Library of Science ;COPYRIGHT 2017 Public Library of Science ;2017 Mousavi et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2017 Mousavi et al 2017 Mousavi et al ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0169817 ;PMID: 28263994 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
13	Material Type: Article	G-SQZ: compact encoding of genomic sequence and quality data Bioinformatics, 2010-09, Vol.26 (17), p.2192-2194 [Peer Reviewed Journal] 2015 INIST-CNRS ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btq346 ;PMID: 20605925 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
14	Material Type: Article	Genome‐scale models of metabolism and gene expression extend and refine growth phenotype prediction Molecular systems biology, 2013, Vol.9 (1), p.693-n/a [Peer Reviewed Journal] Copyright © 2013 EMBO and Macmillan Publishers Limited ;Copyright Nature Publishing Group Oct 2013 ;2013. This work is published under http://creativecommons.org/licenses/by-nc-sa/3.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;Copyright © 2013, EMBO and Macmillan Publishers Limited 2013 EMBO and Macmillan Publishers Limited ;ISSN: 1744-4292 ;EISSN: 1744-4292 ;DOI: 10.1038/msb.2013.52 ;PMID: 24084808 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
15	Material Type: Article	Selected reaction monitoring for quantitative proteomics: a tutorial Molecular systems biology, 2008, Vol.4 (1), p.222-n/a [Peer Reviewed Journal] Copyright © 2008 EMBO and Nature Publishing Group ;Copyright Nature Publishing Group Oct 2008 ;2008. This work is published under http://creativecommons.org/licenses/by-nc-sa/3.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;Copyright © 2008, EMBO and Nature Publishing Group 2008 ;ISSN: 1744-4292 ;EISSN: 1744-4292 ;DOI: 10.1038/msb.2008.61 ;PMID: 18854821 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
16	Material Type: Article	Quantum Annealing for Prime Factorization Scientific reports, 2018-12, Vol.8 (1), p.17667-9, Article 17667 [Peer Reviewed Journal] 2018. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2018 ;ISSN: 2045-2322 ;EISSN: 2045-2322 ;DOI: 10.1038/s41598-018-36058-z ;PMID: 30518780 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
17	Material Type: Article	The unreasonable effectiveness of deep learning in artificial intelligence Proceedings of the National Academy of Sciences - PNAS, 2020-12, Vol.117 (48), p.30033-30038 [Peer Reviewed Journal] Copyright National Academy of Sciences Dec 1, 2020 ;2020 ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.1907373117 ;PMID: 31992643 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
18	Material Type: Article	Next generation reservoir computing Nature communications, 2021-09, Vol.12 (1), p.5564-5564, Article 5564 [Peer Reviewed Journal] 2021. The Author(s). ;The Author(s) 2021. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2021 ;ISSN: 2041-1723 ;EISSN: 2041-1723 ;DOI: 10.1038/s41467-021-25801-2 ;PMID: 34548491 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
19	Material Type: Article	Explicit solution of divide-and-conquer dividing by a half recurrences with polynomial independent term PloS one, 2022-11, Vol.17 (11), p.e0274448-e0274448 [Peer Reviewed Journal] 2022 Coronado et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2022 Coronado et al 2022 Coronado et al ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0274448 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by
20	Material Type: Article	Read-based phasing of related individuals Bioinformatics, 2016-06, Vol.32 (12), p.i234-i242 [Peer Reviewed Journal] The Author 2016. Published by Oxford University Press. ;The Author 2016. Published by Oxford University Press. 2016 ;ISSN: 1367-4803 ;ISSN: 1367-4811 ;EISSN: 1367-4811 ;EISSN: 1460-2059 ;DOI: 10.1093/bioinformatics/btw276 ;PMID: 27307622 Full text available View Online Details Recommendations Reviews Times Cited External Links Citations Cited by

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Results 1 - 20 of 999 for All Library Resources

The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com. ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;EISSN: 1460-2059 ;DOI: 10.1093/bioinformatics/btv737 ;PMID: 26677965

2015 INIST-CNRS ;The Author 2010. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oxfordjournals.org 2010 ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btq140 ;PMID: 20378557

Volumes 1–89 and 106–114, copyright as a collective work only; author(s) retains copyright to individual articles ;Copyright National Academy of Sciences Sep 26, 2017 ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.1614694114 ;PMID: 28900013

2015 INIST-CNRS ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btq346 ;PMID: 20605925

Copyright National Academy of Sciences Dec 1, 2020 ;2020 ;ISSN: 0027-8424 ;EISSN: 1091-6490 ;DOI: 10.1073/pnas.1907373117 ;PMID: 31992643

The Author 2016. Published by Oxford University Press. ;The Author 2016. Published by Oxford University Press. 2016 ;ISSN: 1367-4803 ;ISSN: 1367-4811 ;EISSN: 1367-4811 ;EISSN: 1460-2059 ;DOI: 10.1093/bioinformatics/btw276 ;PMID: 27307622

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