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Material Type: Article
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Analysis of co-authorship networks among Brazilian graduate programs in computer sciencePloS one, 2022-01, Vol.17 (1), p.e0261200-e0261200 [Peer Reviewed Journal]COPYRIGHT 2022 Public Library of Science ;2022 Nunes da Silva et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2022 Nunes da Silva et al 2022 Nunes da Silva et al ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0261200 ;PMID: 35041687Full text available |
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Revealing the queer-spectrum in STEM through robust demographic data collection in undergraduate engineering and computer science courses at four institutionsPloS one, 2022-03, Vol.17 (3), p.e0264267-e0264267 [Peer Reviewed Journal]COPYRIGHT 2022 Public Library of Science ;2022 Casper et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2022 Casper et al 2022 Casper et al ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0264267 ;PMID: 35271597Full text available |
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Material Type: Article
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Pattern recognition software and techniques for biological image analysisPLoS computational biology, 2010-11, Vol.6 (11), p.e1000974-e1000974 [Peer Reviewed Journal]COPYRIGHT 2010 Public Library of Science ;COPYRIGHT 2010 Public Library of Science ;This is an open-access article distributed under the terms of the Creative Commons Public Domain declaration which stipulates that, once placed in the public domain, this work may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. 2010 ;2010 Public Library of Science. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Citation: Shamir L, Delaney JD, Orlov N, Eckley DM, Goldberg IG (2010) Pattern Recognition Software and Techniques for Biological Image Analysis. PLoS Comput Biol 6(11): e1000974. doi:10.1371/journal.pcbi.1000974 ;ISSN: 1553-7358 ;ISSN: 1553-734X ;EISSN: 1553-7358 ;DOI: 10.1371/journal.pcbi.1000974 ;PMID: 21124870Full text available |
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Statistical and Machine Learning forecasting methods: Concerns and ways forwardPloS one, 2018-03, Vol.13 (3), p.e0194889-e0194889 [Peer Reviewed Journal]COPYRIGHT 2018 Public Library of Science ;COPYRIGHT 2018 Public Library of Science ;2018 Makridakis et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2018 Makridakis et al 2018 Makridakis et al ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0194889 ;PMID: 29584784Full text available |
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Material Type: Article
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The gender gap in science: How long until women are equally represented?PLoS biology, 2018-04, Vol.16 (4), p.e2004956-e2004956 [Peer Reviewed Journal]2018 Public Library of Science. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Holman L, Stuart-Fox D, Hauser CE (2018) The gender gap in science: How long until women are equally represented? PLoS Biol 16(4): e2004956. https://doi.org/10.1371/journal.pbio.2004956 ;2018 Holman et al 2018 Holman et al ;2018 Public Library of Science. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Holman L, Stuart-Fox D, Hauser CE (2018) The gender gap in science: How long until women are equally represented? PLoS Biol 16(4): e2004956. https://doi.org/10.1371/journal.pbio.2004956 ;ISSN: 1545-7885 ;ISSN: 1544-9173 ;EISSN: 1545-7885 ;DOI: 10.1371/journal.pbio.2004956 ;PMID: 29672508Full text available |
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Material Type: Article
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ForceAtlas2, a continuous graph layout algorithm for handy network visualization designed for the Gephi softwarePloS one, 2014-06, Vol.9 (6), p.e98679-e98679 [Peer Reviewed Journal]COPYRIGHT 2014 Public Library of Science ;COPYRIGHT 2014 Public Library of Science ;2014 Jacomy et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;Attribution ;2014 Jacomy et al 2014 Jacomy et al ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0098679 ;PMID: 24914678Full text available |
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Material Type: Article
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MUMmer4: A fast and versatile genome alignment systemPLoS computational biology, 2018-01, Vol.14 (1), p.e1005944-e1005944 [Peer Reviewed Journal]COPYRIGHT 2018 Public Library of Science ;2018 Public Library of Science. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Marçais G, Delcher AL, Phillippy AM, Coston R, Salzberg SL, Zimin A (2018) MUMmer4: A fast and versatile genome alignment system. PLoS Comput Biol 14(1): e1005944. https://doi.org/10.1371/journal.pcbi.1005944 ;2018 Public Library of Science. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Marçais G, Delcher AL, Phillippy AM, Coston R, Salzberg SL, Zimin A (2018) MUMmer4: A fast and versatile genome alignment system. PLoS Comput Biol 14(1): e1005944. https://doi.org/10.1371/journal.pcbi.1005944 ;ISSN: 1553-7358 ;ISSN: 1553-734X ;EISSN: 1553-7358 ;DOI: 10.1371/journal.pcbi.1005944 ;PMID: 29373581Full text available |
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Material Type: Article
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RNA-Seq differential expression analysis: An extended review and a software toolPloS one, 2017-12, Vol.12 (12), p.e0190152-e0190152 [Peer Reviewed Journal]COPYRIGHT 2017 Public Library of Science ;COPYRIGHT 2017 Public Library of Science ;2017 Costa-Silva et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2017 Costa-Silva et al 2017 Costa-Silva et al ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0190152 ;PMID: 29267363Full text available |
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Material Type: Article
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Powerlaw: a Python package for analysis of heavy-tailed distributionsPloS one, 2014-01, Vol.9 (1), p.e85777-e85777 [Peer Reviewed Journal]COPYRIGHT 2014 Public Library of Science ;COPYRIGHT 2014 Public Library of Science ;2014. This is an open-access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2014 ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0085777 ;PMID: 24489671Full text available |
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Material Type: Article
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Deep learning for chest radiograph diagnosis: A retrospective comparison of the CheXNeXt algorithm to practicing radiologistsPLoS medicine, 2018-11, Vol.15 (11), p.e1002686-e1002686 [Peer Reviewed Journal]COPYRIGHT 2018 Public Library of Science ;COPYRIGHT 2018 Public Library of Science ;2018 Rajpurkar et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2018 Rajpurkar et al 2018 Rajpurkar et al ;ISSN: 1549-1676 ;ISSN: 1549-1277 ;EISSN: 1549-1676 ;DOI: 10.1371/journal.pmed.1002686 ;PMID: 30457988Full text available |
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Material Type: Article
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Integrating Hi-C links with assembly graphs for chromosome-scale assemblyPLoS computational biology, 2019-08, Vol.15 (8), p.e1007273-e1007273 [Peer Reviewed Journal]COPYRIGHT 2019 Public Library of Science ;COPYRIGHT 2019 Public Library of Science ;This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication: https://creativecommons.org/publicdomain/zero/1.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;ISSN: 1553-7358 ;ISSN: 1553-734X ;EISSN: 1553-7358 ;DOI: 10.1371/journal.pcbi.1007273 ;PMID: 31433799Full text available |
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Material Type: Article
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MRIQC: Advancing the automatic prediction of image quality in MRI from unseen sitesPloS one, 2017-09, Vol.12 (9), p.e0184661-e0184661 [Peer Reviewed Journal]COPYRIGHT 2017 Public Library of Science ;COPYRIGHT 2017 Public Library of Science ;2017 Esteban et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2017 Esteban et al 2017 Esteban et al ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0184661 ;PMID: 28945803Full text available |
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Material Type: Article
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Reproducible big data science: A case study in continuous FAIRnessPloS one, 2019-04, Vol.14 (4), p.e0213013-e0213013 [Peer Reviewed Journal]COPYRIGHT 2019 Public Library of Science ;COPYRIGHT 2019 Public Library of Science ;2019 Madduri et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2019 Madduri et al 2019 Madduri et al ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0213013 ;PMID: 30973881Full text available |
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DeepConv-DTI: Prediction of drug-target interactions via deep learning with convolution on protein sequencesPLoS computational biology, 2019-06, Vol.15 (6), p.e1007129 [Peer Reviewed Journal]COPYRIGHT 2019 Public Library of Science ;COPYRIGHT 2019 Public Library of Science ;2019 Lee et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2019 Lee et al 2019 Lee et al ;ISSN: 1553-7358 ;ISSN: 1553-734X ;EISSN: 1553-7358 ;DOI: 10.1371/journal.pcbi.1007129 ;PMID: 31199797Full text available |
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Material Type: Article
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Software for computing and annotating genomic rangesPLoS computational biology, 2013-08, Vol.9 (8), p.e1003118-e1003118 [Peer Reviewed Journal]COPYRIGHT 2013 Public Library of Science ;COPYRIGHT 2013 Public Library of Science ;2013 Lawrence et al 2013 Lawrence et al ;2013 Lawrence et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited: Lawrence M, Huber W, Pagès H, Aboyoun P, Carlson M, et al. (2013) Software for Computing and Annotating Genomic Ranges. PLoS Comput Biol 9(8): e1003118. doi:10.1371/journal.pcbi.1003118 ;ISSN: 1553-7358 ;ISSN: 1553-734X ;EISSN: 1553-7358 ;DOI: 10.1371/journal.pcbi.1003118 ;PMID: 23950696Full text available |
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Material Type: Article
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SARTools: A DESeq2- and EdgeR-Based R Pipeline for Comprehensive Differential Analysis of RNA-Seq DataPloS one, 2016-06, Vol.11 (6), p.e0157022-e0157022 [Peer Reviewed Journal]COPYRIGHT 2016 Public Library of Science ;COPYRIGHT 2016 Public Library of Science ;2016 Varet et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;Attribution ;2016 Varet et al 2016 Varet et al ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0157022 ;PMID: 27280887Full text available |
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Material Type: Article
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Deep-learning-assisted diagnosis for knee magnetic resonance imaging: Development and retrospective validation of MRNetPLoS medicine, 2018-11, Vol.15 (11), p.e1002699-e1002699 [Peer Reviewed Journal]COPYRIGHT 2018 Public Library of Science ;COPYRIGHT 2018 Public Library of Science ;2018 Bien et al. This is an open access article distributed under the terms of the Creative Commons Attribution License: http://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2018 Bien et al 2018 Bien et al ;ISSN: 1549-1676 ;ISSN: 1549-1277 ;EISSN: 1549-1676 ;DOI: 10.1371/journal.pmed.1002699 ;PMID: 30481176Full text available |
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Material Type: Article
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phyloseq: an R package for reproducible interactive analysis and graphics of microbiome census dataPloS one, 2013-04, Vol.8 (4), p.e61217-e61217 [Peer Reviewed Journal]COPYRIGHT 2013 Public Library of Science ;COPYRIGHT 2013 Public Library of Science ;2013 McMurdie, Holmes. This is an open-access article distributed under the terms of the Creative Commons Attribution License: https://creativecommons.org/licenses/by/4.0/ (the “License”), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2013 McMurdie, Holmes 2013 McMurdie, Holmes ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0061217 ;PMID: 23630581Full text available |
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Material Type: Article
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A methodology for adaptable and robust ecosystem services assessmentPloS one, 2014-03, Vol.9 (3), p.e91001 [Peer Reviewed Journal]COPYRIGHT 2014 Public Library of Science ;COPYRIGHT 2014 Public Library of Science ;2014. This is an open-access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication. Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;2014 ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0091001 ;PMID: 24625496Full text available |
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Material Type: Article
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Finding statistically significant communities in networksPloS one, 2011-04, Vol.6 (4), p.e18961-e18961 [Peer Reviewed Journal]COPYRIGHT 2011 Public Library of Science ;COPYRIGHT 2011 Public Library of Science ;Copyright Public Library of Science Apr 2011 ;Lancichinetti et al. 2011 ;ISSN: 1932-6203 ;EISSN: 1932-6203 ;DOI: 10.1371/journal.pone.0018961 ;PMID: 21559480Full text available |