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1
Launching into clinical space with medspaCy: a new clinical text processing toolkit in Python
Launching into clinical space with medspaCy: a new clinical text processing toolkit in Python
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Launching into clinical space with medspaCy: a new clinical text processing toolkit in Python

AMIA ... Annual Symposium proceedings, 2021, Vol.2021, p.438-447 [Peer Reviewed Journal]

2021 AMIA - All rights reserved. ;2021 AMIA - All rights reserved. 2021 ;EISSN: 1942-597X ;PMID: 35308962

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2
Drug repurposing: progress, challenges and recommendations
Drug repurposing: progress, challenges and recommendations
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Drug repurposing: progress, challenges and recommendations

Nature reviews. Drug discovery, 2019-01, Vol.18 (1), p.41-58 [Peer Reviewed Journal]

COPYRIGHT 2019 Nature Publishing Group ;Copyright Nature Publishing Group Jan 2019 ;ISSN: 1474-1776 ;EISSN: 1474-1784 ;DOI: 10.1038/nrd.2018.168 ;PMID: 30310233

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3
AI am a rheumatologist: a practical primer to large language models for rheumatologists
AI am a rheumatologist: a practical primer to large language models for rheumatologists
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AI am a rheumatologist: a practical primer to large language models for rheumatologists

Rheumatology (Oxford, England), 2023-10, Vol.62 (10), p.3256-3260 [Peer Reviewed Journal]

The Author(s) 2023. Published by Oxford University Press on behalf of the British Society for Rheumatology. 2023 ;ISSN: 1462-0324 ;EISSN: 1462-0332 ;DOI: 10.1093/rheumatology/kead291

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4
Natural Language Processing: Its Potential Role in Clinical Care and Clinical Research
Natural Language Processing: Its Potential Role in Clinical Care and Clinical Research
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Natural Language Processing: Its Potential Role in Clinical Care and Clinical Research

Schizophrenia bulletin, 2022-09, Vol.48 (5), p.958-959 [Peer Reviewed Journal]

Published by Oxford University Press on behalf of the Maryland Psychiatric Research Center 2022. 2022 ;ISSN: 0586-7614 ;EISSN: 1745-1701 ;DOI: 10.1093/schbul/sbac092 ;PMID: 35849122

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5
Automated methods for the summarization of electronic health records
Automated methods for the summarization of electronic health records
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Automated methods for the summarization of electronic health records

Journal of the American Medical Informatics Association : JAMIA, 2015-09, Vol.22 (5), p.938-947 [Peer Reviewed Journal]

The Author 2015. Published by Oxford University Press on behalf of the American Medical Informatics Association. All rights reserved. 2015 ;The Author 2015. Published by Oxford University Press on behalf of the American Medical Informatics Association. All rights reserved. ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1093/jamia/ocv032 ;PMID: 25882031

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6
Natural Language Processing and Psychosis: On the Need for Comprehensive Psychometric Evaluation
Natural Language Processing and Psychosis: On the Need for Comprehensive Psychometric Evaluation
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Natural Language Processing and Psychosis: On the Need for Comprehensive Psychometric Evaluation

Schizophrenia bulletin, 2022-09, Vol.48 (5), p.939-948 [Peer Reviewed Journal]

The Author(s) 2022. Published by Oxford University Press on behalf of the Maryland Psychiatric Research Center. All rights reserved. For permissions, please email: journals.permissions@oup.com 2022 ;The Author(s) 2022. Published by Oxford University Press on behalf of the Maryland Psychiatric Research Center. All rights reserved. For permissions, please email: journals.permissions@oup.com. ;info:eu-repo/semantics/openAccess ;ISSN: 0586-7614 ;ISSN: 1745-1701 ;EISSN: 1745-1701 ;DOI: 10.1093/schbul/sbac051 ;PMID: 35738008

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7
BioGPT: generative pre-trained transformer for biomedical text generation and mining
BioGPT: generative pre-trained transformer for biomedical text generation and mining
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BioGPT: generative pre-trained transformer for biomedical text generation and mining

Briefings in bioinformatics, 2022-11, Vol.23 (6) [Peer Reviewed Journal]

The Author(s) 2022. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com. ;ISSN: 1467-5463 ;EISSN: 1477-4054 ;DOI: 10.1093/bib/bbac409 ;PMID: 36156661

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8
A comprehensive study of named entity recognition in Chinese clinical text
A comprehensive study of named entity recognition in Chinese clinical text
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A comprehensive study of named entity recognition in Chinese clinical text

Journal of the American Medical Informatics Association : JAMIA, 2014-09, Vol.21 (5), p.808-814 [Peer Reviewed Journal]

Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://group.bmj.com/group/rights-licensing/permissions. ;Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://group.bmj.com/group/rights-licensing/permissions 2014 ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1136/amiajnl-2013-002381 ;PMID: 24347408

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9
Community challenges in biomedical text mining over 10 years: success, failure and the future
Community challenges in biomedical text mining over 10 years: success, failure and the future
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Community challenges in biomedical text mining over 10 years: success, failure and the future

Briefings in bioinformatics, 2016-01, Vol.17 (1), p.132-144 [Peer Reviewed Journal]

Published by Oxford University Press 2015. This work is written by US Government employees and is in the public domain in the US. ;Published by Oxford University Press 2015. This work is written by US Government employees and is in the public domain in the US. 2015 ;ISSN: 1467-5463 ;EISSN: 1477-4054 ;DOI: 10.1093/bib/bbv024 ;PMID: 25935162

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10
Toward high-throughput phenotyping: unbiased automated feature extraction and selection from knowledge sources
Toward high-throughput phenotyping: unbiased automated feature extraction and selection from knowledge sources
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Toward high-throughput phenotyping: unbiased automated feature extraction and selection from knowledge sources

Journal of the American Medical Informatics Association : JAMIA, 2015-09, Vol.22 (5), p.993-1000 [Peer Reviewed Journal]

The Author 2015. Published by Oxford University Press on behalf of the American Medical Informatics Association. All rights reserved. For Permissions, please email: journals.permissions@oup.com 2015 ;The Author 2015. Published by Oxford University Press on behalf of the American Medical Informatics Association. All rights reserved. For Permissions, please email: journals.permissions@oup.com. ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1093/jamia/ocv034 ;PMID: 25929596

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11
Towards User-centered Corpus Development: Lessons Learnt from Designing and Developing MedTator
Towards User-centered Corpus Development: Lessons Learnt from Designing and Developing MedTator
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Towards User-centered Corpus Development: Lessons Learnt from Designing and Developing MedTator

AMIA ... Annual Symposium proceedings, 2022, Vol.2022, p.532-541 [Peer Reviewed Journal]

2022 AMIA - All rights reserved. ;EISSN: 1942-597X ;PMID: 37128369

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12
MERIT: M inimal Sup E rvision Through Label Augmentation for Biomedical RelatIon Ex T raction
MERIT: M inimal Sup E rvision Through Label Augmentation for Biomedical RelatIon Ex T raction
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MERIT: M inimal Sup E rvision Through Label Augmentation for Biomedical RelatIon Ex T raction

AMIA ... Annual Symposium proceedings, 2022, Vol.2022, p.425 [Peer Reviewed Journal]

2022 AMIA - All rights reserved. ;EISSN: 1942-597X ;PMID: 37128402

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13
Artificial intelligence in radiology
Artificial intelligence in radiology
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Artificial intelligence in radiology

Nature reviews. Cancer, 2018-08, Vol.18 (8), p.500-510 [Peer Reviewed Journal]

COPYRIGHT 2018 Nature Publishing Group ;COPYRIGHT 2018 Nature Publishing Group ;Copyright Nature Publishing Group Aug 2018 ;ISSN: 1474-175X ;EISSN: 1474-1768 ;DOI: 10.1038/s41568-018-0016-5 ;PMID: 29777175

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14
Computer science: The learning machines
Computer science: The learning machines
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Computer science: The learning machines

Nature (London), 2014-01, Vol.505 (7482), p.146-148 [Peer Reviewed Journal]

ISSN: 0028-0836 ;EISSN: 1476-4687 ;DOI: 10.1038/505146a ;PMID: 24402264

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15
A comparative study of pretrained language models for long clinical text
A comparative study of pretrained language models for long clinical text
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A comparative study of pretrained language models for long clinical text

Journal of the American Medical Informatics Association : JAMIA, 2023-01, Vol.30 (2), p.340-347 [Peer Reviewed Journal]

The Author(s) 2022. Published by Oxford University Press on behalf of the American Medical Informatics Association. All rights reserved. For permissions, please email: journals.permissions@oup.com. ;The Author(s) 2022. Published by Oxford University Press on behalf of the American Medical Informatics Association. All rights reserved. For permissions, please email: journals.permissions@oup.com 2022 ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1093/jamia/ocac225 ;PMID: 36451266

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16
MIMIC-CXR, a de-identified publicly available database of chest radiographs with free-text reports
MIMIC-CXR, a de-identified publicly available database of chest radiographs with free-text reports
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MIMIC-CXR, a de-identified publicly available database of chest radiographs with free-text reports

Scientific data, 2019-12, Vol.6 (1), p.317-8, Article 317 [Peer Reviewed Journal]

2019. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License. ;The Author(s) 2019 ;ISSN: 2052-4463 ;EISSN: 2052-4463 ;DOI: 10.1038/s41597-019-0322-0 ;PMID: 31831740

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17
Recent Advances in Using Natural Language Processing to Address Public Health Research Questions Using Social Media and ConsumerGenerated Data
Recent Advances in Using Natural Language Processing to Address Public Health Research Questions Using Social Media and ConsumerGenerated Data
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Recent Advances in Using Natural Language Processing to Address Public Health Research Questions Using Social Media and ConsumerGenerated Data

Yearbook of medical informatics, 2019-08, Vol.28 (1), p.208-217

ISSN: 0943-4747 ;EISSN: 2364-0502 ;DOI: 10.1055/s-0039-1677918 ;PMID: 31419834

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18
Medical Information Extraction in the Age of Deep Learning
Medical Information Extraction in the Age of Deep Learning
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Medical Information Extraction in the Age of Deep Learning

Yearbook of medical informatics, 2020-08, Vol.29 (1), p.208-220

ISSN: 0943-4747 ;EISSN: 2364-0502 ;DOI: 10.1055/s-0040-1702001 ;PMID: 32823318

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19
Natural language processing and machine learning approaches for food categorization and nutrition quality prediction compared with traditional methods
Natural language processing and machine learning approaches for food categorization and nutrition quality prediction compared with traditional methods
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Natural language processing and machine learning approaches for food categorization and nutrition quality prediction compared with traditional methods

The American journal of clinical nutrition, 2023-03, Vol.117 (3), p.553-563 [Peer Reviewed Journal]

2022 American Society for Nutrition ;Copyright © 2022 American Society for Nutrition. Published by Elsevier Inc. All rights reserved. ;ISSN: 0002-9165 ;EISSN: 1938-3207 ;DOI: 10.1016/j.ajcnut.2022.11.022 ;PMID: 36872019

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20
Clinical trial cohort selection based on multi-level rule-based natural language processing system
Clinical trial cohort selection based on multi-level rule-based natural language processing system
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Clinical trial cohort selection based on multi-level rule-based natural language processing system

Journal of the American Medical Informatics Association : JAMIA, 2019-11, Vol.26 (11), p.1218-1226 [Peer Reviewed Journal]

The Author(s) 2019. Published by Oxford University Press on behalf of the American Medical Informatics Association. All rights reserved. For permissions, please email: journals.permissions@oup.com 2019 ;The Author(s) 2019. Published by Oxford University Press on behalf of the American Medical Informatics Association. All rights reserved. For permissions, please email: journals.permissions@oup.com. ;ISSN: 1067-5027 ;EISSN: 1527-974X ;DOI: 10.1093/jamia/ocz109 ;PMID: 31300825

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