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Results 1 - 20 of 18,421  for All Library Resources

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1
Quantification of cell behaviors and computational modeling show that cell directional behaviors drive zebrafish pectoral fin morphogenesis
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Quantification of cell behaviors and computational modeling show that cell directional behaviors drive zebrafish pectoral fin morphogenesis

Bioinformatics (Oxford, England), 2021-09, Vol.37 (18), p.2946-2954 [Peer Reviewed Journal]

Distributed under a Creative Commons Attribution 4.0 International License ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btab201

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2
BioBERT: a pre-trained biomedical language representation model for biomedical text mining
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BioBERT: a pre-trained biomedical language representation model for biomedical text mining

Bioinformatics, 2020-02, Vol.36 (4), p.1234-1240 [Peer Reviewed Journal]

The Author(s) 2019. Published by Oxford University Press. 2019 ;The Author(s) 2019. Published by Oxford University Press. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btz682 ;PMID: 31501885

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3
RAxML-NG: a fast, scalable and user-friendly tool for maximum likelihood phylogenetic inference
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RAxML-NG: a fast, scalable and user-friendly tool for maximum likelihood phylogenetic inference

Bioinformatics, 2019-11, Vol.35 (21), p.4453-4455 [Peer Reviewed Journal]

The Author(s) 2019. Published by Oxford University Press. 2019 ;The Author(s) 2019. Published by Oxford University Press. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btz305 ;PMID: 31070718

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4
fastp: an ultra-fast all-in-one FASTQ preprocessor
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fastp: an ultra-fast all-in-one FASTQ preprocessor

Bioinformatics, 2018-09, Vol.34 (17), p.i884-i890 [Peer Reviewed Journal]

The Author(s) 2018. Published by Oxford University Press. 2018 ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty560 ;PMID: 30423086

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5
Minimap2: pairwise alignment for nucleotide sequences
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Minimap2: pairwise alignment for nucleotide sequences

Bioinformatics, 2018-09, Vol.34 (18), p.3094-3100 [Peer Reviewed Journal]

The Author(s) 2018. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com 2018 ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty191 ;PMID: 29750242

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6
TISIDB: an integrated repository portal for tumor–immune system interactions
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TISIDB: an integrated repository portal for tumor–immune system interactions

Bioinformatics, 2019-10, Vol.35 (20), p.4200-4202 [Peer Reviewed Journal]

The Author(s) 2019. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com 2019 ;The Author(s) (2019). Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btz210 ;PMID: 30903160

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7
Nextstrain: real-time tracking of pathogen evolution
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Article
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Nextstrain: real-time tracking of pathogen evolution

Bioinformatics, 2018-12, Vol.34 (23), p.4121-4123 [Peer Reviewed Journal]

The Author(s) 2018. Published by Oxford University Press. 2018 ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty407 ;PMID: 29790939

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8
VarSome: the human genomic variant search engine
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VarSome: the human genomic variant search engine

Bioinformatics (Oxford, England), 2019-06, Vol.35 (11), p.1978-1980 [Peer Reviewed Journal]

The Author(s) 2018. Published by Oxford University Press. ;The Author(s) 2018. Published by Oxford University Press. 2018 ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty897 ;PMID: 30376034

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9
clinker & clustermap.js: automatic generation of gene cluster comparison figures
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clinker & clustermap.js: automatic generation of gene cluster comparison figures

Bioinformatics (Oxford, England), 2021-08, Vol.37 (16), p.2473-2475 [Peer Reviewed Journal]

The Author(s) 2021. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com 2021 ;The Author(s) 2021. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com. ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btab007 ;PMID: 33459763

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10
Identifying and removing haplotypic duplication in primary genome assemblies
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Identifying and removing haplotypic duplication in primary genome assemblies

Bioinformatics, 2020-05, Vol.36 (9), p.2896-2898 [Peer Reviewed Journal]

The Author(s) 2020. Published by Oxford University Press. 2020 ;The Author(s) 2020. Published by Oxford University Press. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btaa025 ;PMID: 31971576

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11
NanoPack: visualizing and processing long-read sequencing data
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NanoPack: visualizing and processing long-read sequencing data

Bioinformatics, 2018-08, Vol.34 (15), p.2666-2669 [Peer Reviewed Journal]

The Author(s) 2018. Published by Oxford University Press. 2018 ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty149 ;PMID: 29547981

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12
Heavy-tailed prior distributions for sequence count data: removing the noise and preserving large differences
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Heavy-tailed prior distributions for sequence count data: removing the noise and preserving large differences

Bioinformatics (Oxford, England), 2019-06, Vol.35 (12), p.2084-2092 [Peer Reviewed Journal]

The Author(s) 2018. Published by Oxford University Press. ;The Author(s) 2018. Published by Oxford University Press. 2018 ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty895 ;PMID: 30395178

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13
PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format files
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PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format files

Bioinformatics, 2019-05, Vol.35 (10), p.1786-1788 [Peer Reviewed Journal]

The Author(s) 2018. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com 2018 ;The Author(s) 2018. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty875 ;PMID: 30321304

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14
ShinyGO: a graphical gene-set enrichment tool for animals and plants
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ShinyGO: a graphical gene-set enrichment tool for animals and plants

Bioinformatics, 2020-04, Vol.36 (8), p.2628-2629 [Peer Reviewed Journal]

The Author(s) 2019. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com 2019 ;The Author(s) 2019. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btz931 ;PMID: 31882993

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15
NextPolish: a fast and efficient genome polishing tool for long-read assembly
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NextPolish: a fast and efficient genome polishing tool for long-read assembly

Bioinformatics, 2020-04, Vol.36 (7), p.2253-2255 [Peer Reviewed Journal]

The Author(s) 2019. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com 2019 ;The Author(s) 2019. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btz891 ;PMID: 31778144

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16
admetSAR 2.0: web-service for prediction and optimization of chemical ADMET properties
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admetSAR 2.0: web-service for prediction and optimization of chemical ADMET properties

Bioinformatics, 2019-03, Vol.35 (6), p.1067-1069 [Peer Reviewed Journal]

The Author(s) 2018. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com 2018 ;The Author(s) 2018. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/bty707 ;PMID: 30165565

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17
QMEANDisCo—distance constraints applied on model quality estimation
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QMEANDisCo—distance constraints applied on model quality estimation

Bioinformatics, 2020-03, Vol.36 (6), p.1765-1771 [Peer Reviewed Journal]

The Author(s) 2019. Published by Oxford University Press. 2019 ;The Author(s) 2019. Published by Oxford University Press. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btz828 ;PMID: 31697312

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18
ipyrad: Interactive assembly and analysis of RADseq datasets
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ipyrad: Interactive assembly and analysis of RADseq datasets

Bioinformatics, 2020-04, Vol.36 (8), p.2592-2594 [Peer Reviewed Journal]

The Author(s) 2020. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com 2020 ;The Author(s) 2020. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com. ;ISSN: 1367-4803 ;EISSN: 1460-2059 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btz966 ;PMID: 31904816

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19
Complex heatmaps reveal patterns and correlations in multidimensional genomic data
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Complex heatmaps reveal patterns and correlations in multidimensional genomic data

Bioinformatics (Oxford, England), 2016-09, Vol.32 (18), p.2847-2849 [Peer Reviewed Journal]

The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com. ;ISSN: 1367-4803 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btw313 ;PMID: 27207943

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20
MultiQC: summarize analysis results for multiple tools and samples in a single report
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MultiQC: summarize analysis results for multiple tools and samples in a single report

Bioinformatics (Oxford, England), 2016-10, Vol.32 (19), p.3047-3048 [Peer Reviewed Journal]

The Author 2016. Published by Oxford University Press. ;The Author 2016. Published by Oxford University Press. 2016 ;ISSN: 1367-4803 ;ISSN: 1367-4811 ;EISSN: 1367-4811 ;DOI: 10.1093/bioinformatics/btw354 ;PMID: 27312411

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